Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04206 ATGTTTAATGATGTTGATTTTGTTTCCCAGTTCAGGAGAGGATTAGAGGAAGCTATCAAGCTTCTTCCTTCTAGCCTTGAGCTTGTAATTGGTCTCCATTCAAACGGTGAAGAACAGAAAAATAATTTTGGAAATCGTGGTGAACACAATTCCTTGCATAATGGAGCAGTGAAAGGTGAGGAGCAAGATGGAGGGAAGGACCGATCAAAGAAAAAAGGGAGGAAGAAGGAAATTGTGGATTTGAGGAATCTTCTATTGATGTGTGCACAATCGGTAGCTCACTACTTCACCAATGGTCATGATGCACGCTTGGTTGGGGTTGGTTCTGGCGGTCATGAACAATTTTCTTTCCTGAACTCTCAGAGGATTACTACTGCAGAGTACCTGAAGGCATATCAAGTGTTTCTATCTTTCACTCATTTCAAAAAGTTTACATATTTCTTTGCAAACACAATGATTATGGAAGCTGCTGCAAAATCAGAAACCGTCCATATAATTGATTTTCGCATCCTATTTGGTTTCCAGTGGGTAATTCTTATAAAGTTTTTATCAAACAAAGAGGGTGGTCCTCCCAAGCTGAGGATCACAGGGATAAAGTTTCCCCAACCAGGATTTCGTCCCTCTGAAAGGATTGAGGAGACGAGTCACCGTCTTCCTAACTATTGTAAGCGTTACAGTGTTCCCTTTGAATATCATGTTGTAGTATCAAGGAACCCTAAACCTTAA 726 0.405 MFNDVDFVSQFRRGLEEAIKLLPSSLELVIGLHSNGEEQKNNFGNRGEHNSLHNGAVKGEEQDGGKDRSKKKGRKKEIVDLRNLLLMCAQSVAHYFTNGHDARLVGVGSGGHEQFSFLNSQRITTAEYLKAYQVFLSFTHFKKFTYFFANTMIMEAAAKSETVHIIDFRILFGFQWVILIKFLSNKEGGPPKLRITGIKFPQPGFRPSERIEETSHRLPNYCKRYSVPFEYHVVVSRNPKP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04206 241 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 89 236 IPR005202 -
Vimu6g04206 241 MobiDBLite consensus disorder prediction 53 74 - -
Vimu6g04206 241 ProSiteProfiles GRAS family profile. 72 241 IPR005202 -
Vimu6g04206 241 MobiDBLite consensus disorder prediction 39 74 - -
Vimu6g04206 241 Pfam GRAS domain family 89 237 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04206 Vimu-Chr6 43780885 43781751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04206 1 238 GRAS Transcription Factor Family AT1G07520 36.050 9.28e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu6g04206 GRAS 5.9e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04206 - - vum:124822308 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04206 6 43780885 43781751 Vimu6g04206 6 43780885 43781751 ECH