Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04190 ATGAAGCTGCCATTCACATTACATCAAACCAAGTCTTTCATGAGCCAACAAAACACAGAAATTTATTGTCATTTTTGTGGGAGAGAAGGTGCTCTTTGGAGAGATCATTACTTTGTCAACTCCATTGACCAACAAGGAGACATGCTCACTAAATCCCTGAAGAGCTATCGATGCTCCGCTGGAGGATTAGCAGCTCTTATACACTGTGACAACTTCCGACAATTACTTCCAAAAGAAGCAACTGTTAAGTGCCTTTCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCCTTCTATCATGATGTTACCCAGCTGCAGGGTCTTGCAAAAAGTTTGCACAAAGATTGCATTGATAAAATGGAACCATATAAGGCAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATCTTGGTACCTCAAGGATCAGATCCCCTTGGTCACTGGCAAAGCTGCAGACGGAATATTCGCAATTGTGATGCTAACATGATTGATAAACTTGATGGTTACCGTGGCTCTTTGCTGAAGACTTTGAATGAATTCCAACAACGAAAGGAGATTGGAATGTTTATAAACTCCTGCTTTATCCATTGCCAAACTGAGATGGAAGTAACGTGGCATTCATCCAACTCTCCTAAAATAAATGATAAGAAACTCAACAGTAAGACTGAAATTCACAGTATATTATTCAAGTATTATGCAGAAAAAAAAGGTTATGGAGCTGAAAGCTCTACAATCACCAGTAAAAACCAGAGTGCTCACACTCCTAACCAGAGGATGACTCTCCTCTTAACCCACTAA 864 0.3958 MKLPFTLHQTKSFMSQQNTEIYCHFCGREGALWRDHYFVNSIDQQGDMLTKSLKSYRCSAGGLAALIHCDNFRQLLPKEATVKCLSDAGFFLDEKDISGNSTMRSFYHDVTQLQGLAKSLHKDCIDKMEPYKAEIVKNIKTPLFLVHPAYDFWQIRNILVPQGSDPLGHWQSCRRNIRNCDANMIDKLDGYRGSLLKTLNEFQQRKEIGMFINSCFIHCQTEMEVTWHSSNSPKINDKKLNSKTEIHSILFKYYAEKKGYGAESSTITSKNQSAHTPNQRMTLLLTH 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04190 287 Pfam Pectinacetylesterase 58 242 IPR004963 GO:0016787
Vimu6g04190 287 PANTHER NOTUM-RELATED 57 245 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04190 Vimu-Chr6 43354804 43357247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04190 58 238 Carbohydrate Esterase AT3G09410 58.378 3.55e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04190 K19882 - gmx:100792819 337.806