Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04185 ATGTCCCCAGCAGGTTCTTCAAGATGGAGCCCTACCACTGAACAACTCATGATCTTGGAGGAGCTCTACAGGAGTGGCATTAGAACTCCTAGTGCCTCACAAATTCAGCAAATAACCACACACCTTTCTTTCTATGGCAGGATAGAAGGAAAGAATGTGTTCTACTGGTTTCAGAACCACAAGGCTAGGGATAGACAGAAGCTCAGAAGGAAACTCACCAAGCAACTGCAGCTACAGCAACAACAACTCCAACTCCATCATTGCCATCTCACACCAGATATCACTAACCACTATTTTGCTTATTCCCCTTCTTCTTCAACCCAGGATTTTCCCTTTTATAACCCACCTACCTTTCTTTTTCAGGGAGGATCTGCAAACACATCTGAACAGGCATTGCATTGCGCATGGAATGTGCACAACCTGCAAAACAATCTGGTGGAGAAGGAAGAGGTGACCTTCTACAACAATGGTTGGAGTACACCTGTGGATGTTAACAACCAAGCATCTTCATGTTGCACTTCTCGACCCCTCAAGACCCTTGATCTCTTTCCACTCACAACCACCAGAACCGATGATGAAGACTGCACCACTCCACCACCCAAGGAGCTCTAA 612 0.4608 MSPAGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLTKQLQLQQQQLQLHHCHLTPDITNHYFAYSPSSSTQDFPFYNPPTFLFQGGSANTSEQALHCAWNVHNLQNNLVEKEEVTFYNNGWSTPVDVNNQASSCCTSRPLKTLDLFPLTTTRTDDEDCTTPPPKEL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04185 203 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 195 IPR044555 GO:0003700|GO:0099402
Vimu6g04185 203 FunFam WUSCHEL-related homeobox 4 6 73 - -
Vimu6g04185 203 Gene3D - 3 67 - -
Vimu6g04185 203 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Vimu6g04185 203 CDD homeodomain 8 67 IPR001356 GO:0003677
Vimu6g04185 203 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Vimu6g04185 203 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Vimu6g04185 203 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04185 Vimu-Chr6 43307104 43308129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04185 1 74 Wox Gene Family AT2G28610 83.784 1.62e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vimu6g04185 Homeodomain 6.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04185 - - gmx:102663963 265.003