Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04098 ATGGGAAAGTACATGAAGAAATCTAAAATCGCCGGTGACGTCGCCGCCCTAATCATGGAGTCACCGCCGCCGCACTCGCACCTTGGCGTCCGTACGCGCGCCAAAACCCTCGCGCTTCAGAACTCTCCCCAAACTCTCGACTCCGCCGCGTACCTCCAGCTCCGCAGCCGCCGCCTCCTCAAGATACCCCCTCCCATCCCGGACAAGCCCCGCCGCTGTGCCGCCGTCGATTCTGCCCCCAATTCCCGCCTCTCCCAAACTGCGCTCTCCAAAACGCCGTCGTCCCGCTCCGATGAAAAGTTCGCGCCTTTAGATGACGACAACGCTGAATGCTCATTTGGCCAAAATTTCCTAGACGTCGAAGGCAGGGACGAAAGAAGCACTAGGGAAAGCACACCCTGTAGTTTAATAAGGGACCCAAATGTCATCCATACCCCCGGTTCAACTACAAGGCAAAGGACGCTCCAAATAAAGCATGATCACATACAAAGGAACATTCCACCGGCTCATGAGTTGGAGGAGTTCTTTGCTTATGCAGAGAAGCAGCAACAGAAAATGTTTATGGAAAAGTACAATTTCGACATTGTCAATGATGTACCACTGCCTGGACGGTACGAATGGGTCCCAGTACTCCACTAA 639 0.5383 MGKYMKKSKIAGDVAALIMESPPPHSHLGVRTRAKTLALQNSPQTLDSAAYLQLRSRRLLKIPPPIPDKPRRCAAVDSAPNSRLSQTALSKTPSSRSDEKFAPLDDDNAECSFGQNFLDVEGRDERSTRESTPCSLIRDPNVIHTPGSTTRQRTLQIKHDHIQRNIPPAHELEEFFAYAEKQQQKMFMEKYNFDIVNDVPLPGRYEWVPVLH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04098 212 MobiDBLite consensus disorder prediction 64 106 - -
Vimu6g04098 212 Gene3D p27 150 212 IPR044898 -
Vimu6g04098 212 MobiDBLite consensus disorder prediction 79 97 - -
Vimu6g04098 212 Pfam Cyclin-dependent kinase inhibitor 164 210 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vimu6g04098 212 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 210 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vimu6g04098 212 PIRSF CKI_KRP_plant 1 212 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04098 Vimu-Chr6 41423421 41426954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04098 1 210 Core Cell Cycle Gene Families AT5G48820 44.672 1.83e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04098 - - gmx:100782379 298.901