Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04082 ATGTCTCTTCTACTCAGCACAACAAATGCGTCACGCTTCCTCATTTGCCCCTCACTGCTTTCAGATGCCGACGAAGATTATGGTGAGACTCGTCTAATGGCAACGTCAGTGGTTAACGCTCCATCACGACCATCGTGCGCTTCCTCGGAATCGCTTGCTTCTCCATCCCTTTCTCTCTCATGCTCAACGCAACACCTAAACCCAAGCTTCCATTTCTGGCTATCCCACCATTGTCGGCATCAACGGACCACGCTCCTCTACTGCCAAACCCTCGTGAACCGCCGCACATCAATCGATGACCATTCCTCCTCCGCACTCGCGCCCTCCGCTCTTCTCCACTATTGGTTGAGGGACCCTAAGCGCGCCCCCAACTCATTCCTAAAGACGCAAATTGAGAACACTTTTGATGTTGTTTCCAAGTTCGCTAACGACGTCATTAATGGTAAGATTAAACTTCCTTCATCACCGGAGGGTCGATTTACTCAAACACTGTCTGTCGAAATTCGAGGTTCTGCTTTTGGACCACAATTTGTTACAGAGGCACTGGCTCCTGATAATCCTCCACTCAAGACTAGAAATGGTTTGTTGGAAGTGCAGAAGGCCTTTCGTGAAGCAGGCTTGGATTTTCTTAAACAGAAGTGGGTCCCAGATTTAGATGTTATTACTCAAACATTGGAAGAGAAGTATCCTATCCCACCATTGGTGATCTCATCTGAAAAGGTCATAGTGTATGCATTTTACTTGTAG 747 0.4752 MSLLLSTTNASRFLICPSLLSDADEDYGETRLMATSVVNAPSRPSCASSESLASPSLSLSCSTQHLNPSFHFWLSHHCRHQRTTLLYCQTLVNRRTSIDDHSSSALAPSALLHYWLRDPKRAPNSFLKTQIENTFDVVSKFANDVINGKIKLPSSPEGRFTQTLSVEIRGSAFGPQFVTEALAPDNPPLKTRNGLLEVQKAFREAGLDFLKQKWVPDLDVITQTLEEKYPIPPLVISSEKVIVYAFYL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04082 248 Gene3D - 113 202 - -
Vimu6g04082 248 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 110 188 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vimu6g04082 248 SUPERFAMILY SIS domain 91 185 IPR046348 GO:0097367|GO:1901135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04082 Vimu-Chr6 41154244 41155845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04082 212 243 Glutathione S-transferase Gene Family AT5G16710 68.750 4.46e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04082 K01810 - gmx:100791285 159.844