Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04027 ATGAGAGAGCAAAGCGTTGATTCCTTCTACGCCAAGCTTCGTGATTATGCTTTATCTTCTTCCTCTTCGCCAGTTCTCATTTTTCCTTCAACCTCCGACGTTGATTCTCTCTGCGCTCTTAAGATCATATTCCACATTCTTGAATCTGATTCCATTCGATATGCCTGCTATCCTGTCTCCTCCTTCCAGGAGATCCACAAATATACATCTTCCTCTACCTCAGACGACGACCCTCTTTCCATTGTTTTGGTCAATTGGGGCAACCACCGGGACCTTCGCAAAGAGCTCAGTCTTGGTCCTAATGTTCGTGTCTTTGTTGTCGACAGTCACCGTCCCATTCATCTCCGTAATCTCAGTGACCAAAACGACGCCGTTTTTGTCCTCTTCACCGACGAGCAGCAGTCTGATCTTGTCTATGACTTTGACCTCACCACGCTTGCCAACGCCACTGCTGCTGAGGGTGATGATGAATCCGAACCTGAATCTGAATCGGACTCTGACGATGACGGGAATGGATCTAGGAAGAGGAGAAAAAGGAACGACGATGATGACGATGATGATAAAGAGGATCCGATTAAATTGTACCGGAAGCTGAAGAAGGATTACTATCGATTGGGGACTTTCCATGGGAAGCCGTCCGGGTGTTTGATGTATGAGCTCGCGGATTCTCTCAGGAAGAACACCAATGAGTTGCTCTGGTTGGCTTGCGTTTCACTCACGGATCAGTTTGTGCATGAGAGGTTAAGTGACGAGAGGTACCATCATGGGGTTATGGAGCTTGAGCAGTACATAAACAGTTCTGGGAATTTGGATGTGGTTACTTCGGTTACACTGTCTGATGGTACGAAAATTCGTGCCCCGAATTCTTCGCTGATTACTTATGAGGACCAGCCAAAGCTTATGCTGTTACAGGAGTGGAGTTTGTTTGACTCCATGATGTGCTCTTCTTACATTGCCACTAAGTTGAAGACTTGGAGTGAGAATGGGGTGAAGAAGTTGAACCTTCTGTTTGGGAGGATGGGGTTTGCTCTTGCCGATTGCCATCAGAAGTTTCAGTTCATGAATGTGGAGGTGAAGCGCAAGTTGAAGGGTGAGTTTGAGCGGTTTTTGCCTCAGTATGGACTCACTGATTTCAACTACAGGAGTTTCCAGAGGACTCTTCAGTATAGTTCTAAGGTTTCGGCTGCAGATGTGGTCTATGGTGTGACTGCTTTGCTTGAATCTTTTGTAAAATCGGATGGTTCTAGCGCTTCTAAACAGTTTGGTGTGGCATATGATGCGCTTTCTTTGAACAATATCGACAGCTTGAGAACTGGGATGCAACATGCTATTAAGATTCAGAGGGCCATTTTAAGGCAAGGGAGTGCTGCAATTACCAAGAATGGGTGCATTAGGAGTGGAAGGAGTTTCCGGTGGTTGAAGTTGGAGGATTCAAGTGATGCTAAATTGTTGGGGTACCCACAGGCATTGACTAAGTTTTGTTTTTTTCTTATGGACGCTTTAAGGGAGAAGGGGGCGACAATGAAACCTTTGCTTTGTGCTTGTGTATCACAAGATCCTGGGAAGGTGCTGATTGTAGGGGTTTGTGGGAGGCCACGTTTGGCTGGGGCTCGTGGGAACGCATTTGGGATTGCATTTAGGGCTGCTGCAGAGGAGATTGGAATTGAGTTTTTCCATGAGTTATTTGAATCATCATGGATTCTTCTGGATGCTTCAGCTGTGAATTCTTTCATGGTTAGGTTGATTGAGAAGCTTTGA 1758 0.4596 MREQSVDSFYAKLRDYALSSSSSPVLIFPSTSDVDSLCALKIIFHILESDSIRYACYPVSSFQEIHKYTSSSTSDDDPLSIVLVNWGNHRDLRKELSLGPNVRVFVVDSHRPIHLRNLSDQNDAVFVLFTDEQQSDLVYDFDLTTLANATAAEGDDESEPESESDSDDDGNGSRKRRKRNDDDDDDDKEDPIKLYRKLKKDYYRLGTFHGKPSGCLMYELADSLRKNTNELLWLACVSLTDQFVHERLSDERYHHGVMELEQYINSSGNLDVVTSVTLSDGTKIRAPNSSLITYEDQPKLMLLQEWSLFDSMMCSSYIATKLKTWSENGVKKLNLLFGRMGFALADCHQKFQFMNVEVKRKLKGEFERFLPQYGLTDFNYRSFQRTLQYSSKVSAADVVYGVTALLESFVKSDGSSASKQFGVAYDALSLNNIDSLRTGMQHAIKIQRAILRQGSAAITKNGCIRSGRSFRWLKLEDSSDAKLLGYPQALTKFCFFLMDALREKGATMKPLLCACVSQDPGKVLIVGVCGRPRLAGARGNAFGIAFRAAAEEIGIEFFHELFESSWILLDASAVNSFMVRLIEKL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04027 585 PANTHER CDC45-RELATED PROTEIN 2 584 IPR003874 GO:0006270
Vimu6g04027 585 Pfam CDC45-like protein 163 583 IPR003874 GO:0006270
Vimu6g04027 585 Pfam CDC45-like protein 25 187 IPR003874 GO:0006270
Vimu6g04027 585 MobiDBLite consensus disorder prediction 151 190 - -
Vimu6g04027 585 MobiDBLite consensus disorder prediction 167 190 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04027 1 585 Core DNA Replication Machinery Family AT3G25100 68.543 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04027 K06628 - gmx:100777346 925.62