Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04011 ATGGCTGCCAATTTCTGGACATCATCTCATTACAAGCATCTTCTGGACCAGGAAGATGTGGATATGGTGAATACACTTGACAAGGAAAAGGGTATCACACTGGAGGATTTTAAGCTCATTAAGATGCATATGGCCAGTTATATTTTGAAATTGGCACAACAAGTAAAAGTGAGACAGAGTCTGCAATGCATGAAGGGGAGAGAACAAGGAATTGCCACACTTCTTGAGGCCAAAAGCCCCATGGACATGCAGAATATGAAGGTTGTGGCCACAGCAGTTACATACATGAGGCGTGTTTACACCAAGAAGAGTATGACAGAATATGATCCACGCTTGGTAGCTCCAACATGCTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAAGCTCGGCTTCTTGTATTTTACATTAAAAAACTATATGCTGATGAGAAGTATAGATATGAAATCAAGGACATACTTGAAATGGAAATGAAGGTTTTAGAAGCTCTTAATTATTACCTGGTTGTATACCACCCATACCGTTCACTATCTCCGTTGCTTCAGGATGCAGGTTTGAATGATCTGAACATGACTCAGTTAACTTGA 591 0.4078 MAANFWTSSHYKHLLDQEDVDMVNTLDKEKGITLEDFKLIKMHMASYILKLAQQVKVRQSLQCMKGREQGIATLLEAKSPMDMQNMKVVATAVTYMRRVYTKKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADEKYRYEIKDILEMEMKVLEALNYYLVVYHPYRSLSPLLQDAGLNDLNMTQLT 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04011 196 Gene3D - 7 196 - -
Vimu6g04011 196 PANTHER CYCLIN 19 187 IPR043198 GO:0006357|GO:0016538
Vimu6g04011 196 SMART cyclin_7 69 163 IPR013763 -
Vimu6g04011 196 SUPERFAMILY Cyclin-like 48 171 IPR036915 -
Vimu6g04011 196 PIRSF Cyclin_C_H_G 1 64 - -
Vimu6g04011 196 PIRSF Cyclin_C_H_G 82 196 - -
Vimu6g04011 196 Pfam Cyclin, N-terminal domain 61 169 IPR006671 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04011 87 184 Core Cell Cycle Gene Families AT5G27620 33.673 9.55e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04011 K15161 - gmx:100784345 311.612