Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g03992 | ATGGTTGGGAATTCTTCTGCAGCTAGTAATTGTGGAAGAAAGTCAGTAATATCAATGTACTTGATGAGAATAGAATGCAGGAGAGATCGATTATGGGCTTTGGTGTTGCAGCCATCAAAATACTTCTTTAGGCCAAGATTCTCTGATCATCAATACTTTCAATCTTTGTCCCCAAAGTATGCTTCACATGGCAGGATCATCAGAGAACGTCTTTTAGGTTCATATTCATGTAAACATACTTCATCTACAATTACTTTTGCTGCTCGGGACAAAAGGCCTAGTTTATGTCATAACAGTAGTCAGTTACGTGCCTATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAACAAGTACATGTTAATTCACATGCACGACTTGGAGAACAGGAAAAAGAGGAATGGCTTAATAATGAGATGCTAACTATACAAAATAAAAGGAGAGAATCACCATTTTTGACAAGGAAGGATAAGTTTAAAAATGAGTTCACAAGAAGAATTATTCCTTGGGAAAAAATAAATATTTCCTGGGACACATTTCCTTATCATATTCATGAAAATAGAAAAAATCTTCTTGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGTTTGCTTCAACTTATGGTACTCGGCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGCATTCCTGGCACTGAGCTGTATCGTGAGAGATTGGTTAGAGCTCTTGCACAAGATTTACAAGTTCCTCTTTTAGTGCTCGATAATAGCATCCTTGCTCCTTATGACATTGATGATGATTTATCATCTGATGATGATAATGCAGAGTCTGGGAAGGAGGGTTCTCCCGAATCAGAGAATGATGATGATAATGAAGTCAGCAATGAAGAAGAGTGGGTTAGCAGTACAGAGGAAAAGTCAGATGCAAGTGACAATGAAGATGCAGAAGCAGCAGCTGAAGCACACCTTAAGAAGGTTAAAGCAGCTGTTCTTCGGAAACTTGTCCCTTACACTGTAGAGGAATCTGAGAAGATTGTGGCTGGAGAATCTGAGAGTTCCGAATCCTCCAAGTCTAATTCTAATGATACCAAATCTTCTGATAAGTCTGGATGCCACCTAAAGAAAGGTGACCGTGTGAAGTACACTGGGCCATCTGTTCAAGTTACAGACAAGGATAGACCTTTAACTAATGGTCATAGAGGAGAGGTATATGAGGTCAATGGCGATCAAGTTGCAGTCATCTTGGATATTAATGAAGACAAGGTCAACGAGGGTGAGGTGGAGAACCCCAGTGATGATCATACCAAACCCCCGATTTATTGGATTCATGTTAAGGACATTGTGAATGATCTTGATGCTCAATCAAAGGATTGCTACATTGCTGTGGAGGCTTTATGTGAGGTTTTGCGTAGAAAACAGCCTCTTATTGTCTATTTTCCTCACATTTCACATTGGTTTCATAAATCAGTTCCTAAGTCAAACCGAAATGAGTTTTTTCATAAGGTTGAGGAGATGTTTGACCAGTTGTCTGGTCCTATAATATTGATTTGTGGGCAAAATAAAGTTGAATCAAAGGAGAACGAACTATTTACAATGGTACTACGATACCTTGGACGTATAGCTAAGTTGCCTCTTTCTCTGAAGCGTTGGACTGAGGAAATTAAAGGGGACAAGAAATCAGAAGATGACGAAATTAGCAAGCTCTTTTCTAATGTTCTGAGTATGCATCCACCCAAGGATGAGAATCAGCTGGCAACATTCAAGAAACAACTTGAAGAAGATAAAAAAATCGTCATTTCACGTAGTAATTTGAGTATACTACGGAAGGTTCTCGAAGAACATCAGCTATCATGCATTGACCTTTTACATTTAAATACTGAAGGCATCGTTTTGACAAAGCTCGTCTCAAGATTGAGAAGCAAGGAAACAATGTCAGGGAAGTCTTCTCAGAGACTCAAGGCCCTTGCAAAGGATGAGTTTGAGAACAATTTCATTTCATCTGTAGTACCTCCTGGTGAAATAGGGGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAAAAGTCACTTCATGAACTCGTAATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTAGAGGAAATCTTTTACGGCCCTGTAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGTAAGACCCTTCTGGCCAAGGCACTTGCAACTGAAGCTGGTGCAAATTTTATTAACATAACTTGTTCGAACCTTACTTCAAAGTGGTTTGGAGAAGGTGAAAAACTAACCAAAGCGCTTTTCTCATTTGCCAGCAAACTTACTCCTGTCATTATATTTATTGATGAATTTGCTTCTGAGCATGAGGCCACTAGAAGAATGAGGAATGAATTCATGGCAGCCTGGGATGGATTGAGGTCAAAAGAACACCAACGAATCCTTATTCTTGGTGCAACAAACCGGCCATTTGATCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCCGATGCTGAAAATCGGTTGAAGATTTTAAGCATCTTTCTAACACAAGAAAATTTGGATTCTGAATTTCAGTTAGACAAACTTGCTAACTTGACTGATGGATACTCGGGAAGCGATTTGAAGAACCTCTGCATTGCTGCAGCGTATAGACCTGTTCAAGAGCTCTTAGAGAATGAAAAGAAGGTGGGTCCATCAGTTGCGCATGATGCAACAAGCATGACTGAGTTGAGGAAGTGGAATGAAATGCATGGAGAAGGTGGTAACAGGACAAAACCACCATTTGGATTTGGGAGCTGA | 2805 | 0.3968 | MVGNSSAASNCGRKSVISMYLMRIECRRDRLWALVLQPSKYFFRPRFSDHQYFQSLSPKYASHGRIIRERLLGSYSCKHTSSTITFAARDKRPSLCHNSSQLRAYSSESDGRNASEDKQVHVNSHARLGEQEKEEWLNNEMLTIQNKRRESPFLTRKDKFKNEFTRRIIPWEKINISWDTFPYHIHENRKNLLVECAASHLRHNKFASTYGTRLSSSSGRILLQSIPGTELYRERLVRALAQDLQVPLLVLDNSILAPYDIDDDLSSDDDNAESGKEGSPESENDDDNEVSNEEEWVSSTEEKSDASDNEDAEAAAEAHLKKVKAAVLRKLVPYTVEESEKIVAGESESSESSKSNSNDTKSSDKSGCHLKKGDRVKYTGPSVQVTDKDRPLTNGHRGEVYEVNGDQVAVILDINEDKVNEGEVENPSDDHTKPPIYWIHVKDIVNDLDAQSKDCYIAVEALCEVLRRKQPLIVYFPHISHWFHKSVPKSNRNEFFHKVEEMFDQLSGPIILICGQNKVESKENELFTMVLRYLGRIAKLPLSLKRWTEEIKGDKKSEDDEISKLFSNVLSMHPPKDENQLATFKKQLEEDKKIVISRSNLSILRKVLEEHQLSCIDLLHLNTEGIVLTKLVSRLRSKETMSGKSSQRLKALAKDEFENNFISSVVPPGEIGVKFDDVGALEDVKKSLHELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFINITCSNLTSKWFGEGEKLTKALFSFASKLTPVIIFIDEFASEHEATRRMRNEFMAAWDGLRSKEHQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILSIFLTQENLDSEFQLDKLANLTDGYSGSDLKNLCIAAAYRPVQELLENEKKVGPSVAHDATSMTELRKWNEMHGEGGNRTKPPFGFGS | 934 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g03992 | 934 | MobiDBLite | consensus disorder prediction | 262 | 315 | - | - | |
Vimu6g03992 | 934 | SMART | AAA_5 | 710 | 838 | IPR003593 | GO:0016887 | |
Vimu6g03992 | 934 | MobiDBLite | consensus disorder prediction | 341 | 398 | - | - | |
Vimu6g03992 | 934 | Pfam | AAA+ lid domain | 860 | 893 | IPR041569 | - | |
Vimu6g03992 | 934 | Gene3D | - | 837 | 900 | - | - | |
Vimu6g03992 | 934 | Pfam | ATPase family associated with various cellular activities (AAA) | 714 | 835 | IPR003959 | GO:0005524|GO:0016887 | |
Vimu6g03992 | 934 | Gene3D | - | 673 | 836 | IPR027417 | - | |
Vimu6g03992 | 934 | ProSitePatterns | AAA-protein family signature. | 808 | 827 | IPR003960 | GO:0005524|GO:0016887 | |
Vimu6g03992 | 934 | MobiDBLite | consensus disorder prediction | 296 | 315 | - | - | |
Vimu6g03992 | 934 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 159 | 927 | - | - | |
Vimu6g03992 | 934 | MobiDBLite | consensus disorder prediction | 348 | 363 | - | - | |
Vimu6g03992 | 934 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 673 | 892 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g03992 | Vimu-Chr6 | 39679278 | 39691383 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g03992 | 673 | 896 | Calmodulin-binding Proteins | AT3G56690 | 38.655 | 5.15e-37 | 149 |