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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu6g03982
ATGGAAAACCAGTTCTTCCTCAATGCTCCTCAGCTCCATTTTGACCCTTCACCACCTCCTTGTCCACCTTCTTGGCACTCACTCTCTTCTCCCATGGATGTTCAAGTTTTGAATTGCTCAATTGAGAGGACACATGATTGCTTTTACACACCGCCATGGGACAAGTCAACGGATCATGGTGTTCAGTTTGATTCTGCACTCAGTTCAATGGTGTCTTCTCCTGCAGCTTCCAATTCCAACATGTCAAGTGAGAATTTTGTCATCAGGGAGTTGATTGGCAAATTGGGAAACATTGGTGGTGGTGGCTCTGATGAGATCTCACCTCATTCTCATCCTTTGGTTCCTTCATCTTCCTACATCAATGGCAATAACAGCACCAACACTTCATGTTACAGCACCCCTTTGAGTTCTCCTCCCAAGCTGAGCTTGAACAAGATCCCCACAATGATGAATCACTTGGTGAAAGAGGGCATGCCCCCCAGTTTGAATTCCAGTGTGGCAGAATTCTCAACTGATCCTGGTTTTGCTGAGAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGCAGGACCACCCAATTGGGCCCCAGCAATGCTGAGTTGACTCACAGATCTTCTCCATTGGTGGAAAATGGGAAGCTCCCCAGAGTCTCAAGTAGTCCATCTCTCAAAGTGCTTGGATCTCAAATGAGTGCCCAGGAGAACAAGAATTCTCCATTGCAAGACCAAATGGAAGTGGCCAATTCTCAAGAGGAATCAACAATCTCGGAACAAATTCCAAATGGGGACAATGGAGTGAAACCTTCCCCATATGCGAATTCTAGAAAAAGAAAAGGTCCATCCAAAGGAAAAGCCAAGGAAACTTCAACCCCCACCAACCCCCCTATGGCTGCTGAAGCCAGTGAAAATTCAAATGCAAAGCGCAGCAAGGCTAACGAAGGTGAGGGCAATGAAAATGGCCAAGTGAAGGCAGAGGAAGAGTCCAAAGGGGTAACTAGTAATACAAATGATGACAAACAGAACAAGACTAACTCAAAACCTCCAGAGCCTCCAAAGGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCCACTGACAGTCACAGTCTTGCAGAAAGAGTCCGGAGGGAGAAAATCAGTGAAAGAATGAAGCTTCTCCAAGATCTTGTCCCAGGTTGCAATAAGGTGACAGGTAAAGCACTTATGCTTGATGAAATTATAAACTATGTCCAGTCATTGCAGCGCCAAGTTGAGTTTCTGTCCATGAAGTTGGCTTCTGTTAACACCAAGCTGGATTTTAGTATTGAGAGTCTAATCTCGAAAGATATATTTCAATCAAATAATTCTTTGGCACAGCCAATATTCCCACTAGATTCCTCAGCACCAGCCTTTTATGGGCAACACCCTCAACAAAACCCAGCAATCCACAGTAACATTCCTAATGGAACTGTGTCCCACACCTCAGTGGACCCATTGGATACTGGTTTGTGCCAAAACCTTGGCATGCAGTTATCTCACCTAAATGCCTTTAATGAAGGTGCCTCTCAGTATCCAATAGCATTCTCTGAAGGTGACCTCCACACCATTGTTCAGATGGGATTTGGCCAAACTGCAAATAGGAAAACACCAGTACAATCTCAGAGTTTCAATGGCTCAAATCAAGTACCCCTATGA
1683
0.448
MENQFFLNAPQLHFDPSPPPCPPSWHSLSSPMDVQVLNCSIERTHDCFYTPPWDKSTDHGVQFDSALSSMVSSPAASNSNMSSENFVIRELIGKLGNIGGGGSDEISPHSHPLVPSSSYINGNNSTNTSCYSTPLSSPPKLSLNKIPTMMNHLVKEGMPPSLNSSVAEFSTDPGFAERAAKFSCFGSRSFNGRTTQLGPSNAELTHRSSPLVENGKLPRVSSSPSLKVLGSQMSAQENKNSPLQDQMEVANSQEESTISEQIPNGDNGVKPSPYANSRKRKGPSKGKAKETSTPTNPPMAAEASENSNAKRSKANEGEGNENGQVKAEEESKGVTSNTNDDKQNKTNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTKLDFSIESLISKDIFQSNNSLAQPIFPLDSSAPAFYGQHPQQNPAIHSNIPNGTVSHTSVDPLDTGLCQNLGMQLSHLNAFNEGASQYPIAFSEGDLHTIVQMGFGQTANRKTPVQSQSFNGSNQVPL
560
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu6g03982
560
MobiDBLite
consensus disorder prediction
188
208
-
-
Vimu6g03982
560
MobiDBLite
consensus disorder prediction
288
308
-
-
Vimu6g03982
560
MobiDBLite
consensus disorder prediction
309
336
-
-
Vimu6g03982
560
SMART
finulus
372
422
IPR011598
GO:0046983
Vimu6g03982
560
CDD
bHLH_AtBPE_like
356
441
-
-
Vimu6g03982
560
Gene3D
-
363
438
IPR036638
GO:0046983
Vimu6g03982
560
MobiDBLite
consensus disorder prediction
188
357
-
-
Vimu6g03982
560
FunFam
Basic helix-loop-helix transcription factor
363
435
-
-
Vimu6g03982
560
Pfam
Helix-loop-helix DNA-binding domain
370
417
IPR011598
GO:0046983
Vimu6g03982
560
Coils
Coil
413
433
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu6g03982
Vimu-Chr6
39516186
39518554
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu6g03982
1
526
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT3G07340
43.948
2.59e-110
335
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Vimu6g03982
HLH
4.4e-06
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu6g03982
-
-
gmx:100787699
874.004
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vimu6g03982
6
39516186
39518554
Vimu9g01423
9
22801450
22804269
PCT
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