Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03857 TTGAAGCAGATCAAGCTTGATGCATTGAAAGAAAGAGCTGGGCGAGAGATCCGTGTTTTTGAAACATATGTTTCCTCATCATCAAATGCTGCATTATCCAATGAAGAGGTGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATCACAGACTTTTGGCAGCTAAAAAGGAAGATAAGTTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCACGGAGGTCAGAAATGACCAAGGCTATAATTAGAGTTCGATTCCCAGATAATCACACATTGGAGACTACATTCCACCCATCGGAAACAGTCCAGGATTTAATTGATGTCCTGACAAAAGTTATTGTGCTGCCAGAGCAGCCATTCTATATATATACTACTCCACCTAAAAAGATTATGAAAGACATGTCTCAGAATTTTTATGATGCTGGCTTTTGTCCTGGTGCCATTGTCTACTTCTCATACGATGTCCCAAAAGGTAGCACTGGTCCTTACCTTCATGAAGATATATTGTCTTTGAAGGAACTGCATGCTGCTAATGATCAAGGCCAACAATCTGAGCCTTTAGTACAGTCAGAACCTGAACCTGCTGTGGCAACACATCCTCCTCCTGTTGAACAACGCAAACCTGCTGAGAAAAAACTTGTTAAACCAAAGTGGTTAAAAATGTGA 672 0.4077 MKQIKLDALKERAGREIRVFETYVSSSSNAALSNEEVTDDFYEFTAEDYHRLLAAKKEDKFLKTRKIREAEEAARRSEMTKAIIRVRFPDNHTLETTFHPSETVQDLIDVLTKVIVLPEQPFYIYTTPPKKIMKDMSQNFYDAGFCPGAIVYFSYDVPKGSTGPYLHEDILSLKELHAANDQGQQSEPLVQSEPEPAVATHPPPVEQRKPAEKKLVKPKWLKM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03857 223 SUPERFAMILY Ubiquitin-like 55 153 IPR029071 -
Vimu6g03857 223 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 3 223 IPR044232 GO:0032984|GO:0051117
Vimu6g03857 223 Gene3D - 17 152 - -
Vimu6g03857 223 ProSiteProfiles UBX domain profile. 77 153 IPR001012 GO:0005515
Vimu6g03857 223 CDD UBX2_UBXN9 82 155 - -
Vimu6g03857 223 MobiDBLite consensus disorder prediction 206 223 - -
Vimu6g03857 223 MobiDBLite consensus disorder prediction 181 223 - -
Vimu6g03857 223 Pfam UBX domain 80 149 IPR001012 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03857 15 110 C2H2 Transcription Factor Family AT2G01650 36.000 1.59e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03857 K15627 - gmx:100818386 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03857 6 37476957 37480324 Vimu6g03857 6 37476957 37480324 ECH