Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03855 ATGCCAAGTGTGGCCGTCAAGCTCTACAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTTTGCAGAACCGGATCCAAACCTCTTCCCAACACTCCGACTCGTTCGGTATTACCACCCGACCCGAAGAAGTTGTAGCCGCCGCTAATCCCTCCTTCGCCGACGGCGTCGCCACAAAAGACATCCACATCGACCCCTTGGCCTCTCTCTCCATCCGAATCTTTCTCCCCGAATCGGCCCTCAACGCTCCCGAGTCTCGTTCCAAACCTAGGACTCGCTCCATTCCCGAGCCTCAGCCTCGATCCGCGCACCTCGATTCAATCACACGGAGGAAAAGCTACGGTCCGCCTCTCCTGGAGGAGCGCCGGAGCAACAGCTTCGGAGGGGGCTCCGGCGTGGAGTGTTTGAACCTGATGACGGAAGGAGCGTACCTGGGCTACTCGCCGCCGTCGGTGGCGCAGGGGGAGCGGCGGAGGCTACCTGTGGTCCTCCAGTTCCACGGAGGGGGGTGGGTTAGCGGAGGTAGCGATTCGGTGGCGAACGATATTTTCTGCCGGCGGATTGCCGAGTTATGTGATGTGATAGTGATTGCAGTGGGGTACCGGCTGGCGCCGGAAAACCGGTACCCGGCGGCGTTTGAGGACGGCGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCAAATTTGGCTGAATGTAGCAGGTCGATGAGTGGTGGGAGGAGTGGTGGGCATGGTGGTGGTAGTGGTGGTGGGGAGTTCAAGAAATCGGATGCTCATAAGCATATTGTTGGTTCCTTTGGGGCTTCTGTGGTTGAGCCTTGGCTGGCTGCTCATGGTGATCCTTCAAGATGTGTTCTTCTTGGAGCAAGTTGTGGTGCCAATATTGCAGACTATGTAGCTCGTAAAGCTGTGGAAGGAGGCAAACTTCTGGACCCTGTCAAGGTGGTAGCACAGGTTCTAATGTATCCATTTTTCATAGGAAGTGTTCCCACACGGTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATGCTTGCATGGAAACTTTTCCTACCTGAGGGGGAATTTAGTTTGGACCATCCATCTGCTAATCCCCTTGTCCCGGGTCGGGGTCCTCCTTTAAAGTTGATGCCTCCGACATTGACAGTTGTGGCCGAACATGACTGGATGAGGGATCGTGCCATTGCATACTCAGAGGAGCTCCGAAAGGTGAACGTGGATGCACCTGTTCTTGAGTATAAGGATGCGGTACATGAATTTGCAACACTTGATGTCCTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAAGACATAGCCATATGGATGAAGAAACATATTTCTCTTCGGGGTCATGAATTCTCATATTGA 1383 0.538 MPSVAVKLYSVFFKFLLKHRLQNRIQTSSQHSDSFGITTRPEEVVAAANPSFADGVATKDIHIDPLASLSIRIFLPESALNAPESRSKPRTRSIPEPQPRSAHLDSITRRKSYGPPLLEERRSNSFGGGSGVECLNLMTEGAYLGYSPPSVAQGERRRLPVVLQFHGGGWVSGGSDSVANDIFCRRIAELCDVIVIAVGYRLAPENRYPAAFEDGVKVLNWLAKQANLAECSRSMSGGRSGGHGGGSGGGEFKKSDAHKHIVGSFGASVVEPWLAAHGDPSRCVLLGASCGANIADYVARKAVEGGKLLDPVKVVAQVLMYPFFIGSVPTRSEIKLANSYFYDKAMCMLAWKLFLPEGEFSLDHPSANPLVPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWMKKHISLRGHEFSY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03855 460 SUPERFAMILY alpha/beta-Hydrolases 53 451 IPR029058 -
Vimu6g03855 460 Gene3D alpha/beta hydrolase 13 457 IPR029058 -
Vimu6g03855 460 MobiDBLite consensus disorder prediction 82 125 - -
Vimu6g03855 460 Pfam alpha/beta hydrolase fold 162 425 IPR013094 GO:0016787
Vimu6g03855 460 PANTHER ARYLACETAMIDE DEACETYLASE 53 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03855 Vimu-Chr6 37449208 37452214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03855 1 460 Carbohydrate Esterase AT3G27320 70.996 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03855 - - gmx:100791894 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03855 6 37449208 37452214 Vimu6g03855 6 37449208 37452214 ECH