Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03791 ATGGATACAAAAACAAAAACTTTAACTTGGGTGCTGTTACAAGTTAATGCATTTTTGCAATCAAAAGCTAAAGGGTTGTTAGTTTTGCGAAGTTATGGTTTTGGTTTGTGTGGTGTTGATCGAGGAGGAACAAGATTTCTTGGTGATTTTGTGAAAGAAATTTTGATATCTGAAAGCCTTTCCGTTTTCTTTCTAATGATTCCGTTCAGTTGGGTGGTGTTCGAGTATGTGTATCTAAAACAGGCCTCTTGCAAAGCTTCTAATGCTTTTCTTTATCTGGTCCTCATCAAGGATTTCTTAATGGGTTCACCTCTTAATGGATTGGATTCTTTAGCAGAAGTTCAGAATTCAATTTCTGTGGCAGATCATGATCCTCCTTCAACATCAGGGATTCCCCGGCCATCTCGGCCGCCGTTAAGCACATCCAGAAATCATGGGGCTTCATCCAGTCAGCATAATTATGGAATGAAGACCATCCACCACCAAAAGCTTTCATATCAGGAGGCTGACAGCGTAGAGCGAGATGAAATGCAGAATATGGAGAAGCAACACTATAACACAAATGGGAAATCTGAGTATGTGAGCCTCAATAAAGCTGTTGAAAGTTGTTTAGGAAAGAATATCTCCAAAATGGAAACTAAGTTAAGTATCAATCAACCCTTAAATGCTTCCAAGAATTGTGATTCGTCAAAAGGCATTGTTGATGGAACAAAGAGCAACTGCCAATCAGAGATTACCTTTTGTCCAAGTCCTCAGAATAGTTTCTATTCAGAAGCCAAGGAAAGTTTTGGCAACACTGGAGTCAGTGAATGTGTTAGTGTTGATAAGTCAGTTGAAAGTGGAGAAGTTACTAATTCCTGTGAATTTAACGAGAGCAGGAAGACCAGCATCTGTAGAGGCAGCACTGGAAGTGACGTTAGTGATGAGAGCAGCACTAGTAGTCTGAGCAGTGCTTTGTACAAGCCCCACAAGGCAAATGACATAAGATGGGAAGCAATTCAAGCCATTCGAGCCCGTGATGGGGTGTTGGAAATGAGACATTTCAGGTTATTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCTGAACTAAGTGGCACTAGGACTTGTTTTGCAATGAAAGTAATGAACAAAACTGAGTTGGCAAGTCGCAAGAAGCTTGTTAGGTCTCAGACAGAGAGAGAGATACTGCAGTCTCTAGATCATCCATTTCTACCCACATTGTATACACACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCTGAGATTGCTGCCAGGTTTTACGTGGCAGAAGTTCTCCTTGCCTTGGAGTACTTGCACATGCTTGGGGTGATCTACAGAGATCTGAAACCTGAGAATGTGTTGGTGAGAGAAGATGGACATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGTGCTGTGAGTCCAACTCTGGTGAAATCATCAAACTCTACATTGGAGACAAAAAGCTCTGGATACTGCATTCAGCCTGCGTGCATAGAGCCAACTTGTGTAATTCAGCCAGACTGCATTCAACCATCATGTTTCACACCAAGATTTCTCTCGGGAAAATCCAAGAAAGAAAAAAAGTTGAAGCCAAAGAATGATGTGCAGAATCAGGTGACCCCTCTTCCCGAACTCATTGCCGAGCCCACGAATGCTAGATCAATGTCTTTTGTGGGAACACACGAGTACCTGGCACCTGAAATCATCAAAGGAGAAGGACATGGCAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTGTACGAGCTCTTATTCGGAAGAACGCCGTTCAAAGGTCCGGCGAACCGTGCAACGCTGTTCAATGTTGTTGGGCAGCCCTTAAAATTTCCAGAATCTCCTTCTGTGAGCTTTGCTGCCAGGGACTTGATCAGAGGTTTACTTGTGAAAGAACCTCAGAATCGCCTTGCTTACAGACGTGGAGCAACAGAAATAAAACAACATCCATTTTTTCATAATGTTAACTGGGCTCTGATCCGTTGTGCAAATCCCCCAGAGGTTCCAAGACATGCCATGAAAGCACTTGCAGCTGAAAAGCTGCCTGGAGTGAAGCCTTCTGGGATTGCATTTGGAAAAAAGAAGCAGACGAAGACAATCATCACGTTGAGGGCTTTGAAGGAGGGTCAAAATTTACGAGGTGCTTCAGTAGTGCCAGATAGGTTAGAATTATTGACTGATGATAGGGGTGTCATGCATATGCTGAATATTGCAAGGTTAAATGATGAAGTTCATTTGTACGTGGTTCATAATAACATGGAACCAGACATAATAGAAATGATTGATTGGGTTGATGGTGAGGTTGAGGCTGAAGTTGGAAGTCAAATGAAGGAGGTTGAGGCTGATGGTGATGCTGATGAAGTTGGTAGAGGGTTGGATGAGGTTGATGTTGAGGTTGAACTTGGAACACAAATGGAGGAGGTTCAGGGTGATGTTGATGGTGATGCTGCAGAAGTTGGTAGAGAAATGGAGGAGGCTGAGGGTGAGGTTCAGCCTGAAGTTGGAACACAAAGGGAGGAGGTTCAGGGTGATGTTGATGCTGATGCTGCAGAAGCTGATAGAGAAATGAAGGAGGCTGAGGGTGAGGGTGAGGGTGACGTTGAGGCTGAAGTTGGTAAACAGTCAGTAGAGGAGGAGGAAGTACATCATGCAAAAGAGGCTAAAGTACATGATGTTCATGATTTTGAGCTACAGGATGTACATGAAGATGACGATGGGGATGAGGGTGGACATGATGGTGATGAAGAGGCTGGACAAGATGCTGGTGATGAATACGAAGATGAAGATGAAAATGTAGATGACTCTATTAGTGAAGAAAGTGAAAGTCTAGTTGATGTTAGGGTTGAATGTGACATAAGGACTTCTAAAGGACAACCTTGCAGTCCAAAAGGTGAATGTTCAATGACAAGTGATAATGATGCAGTAGATGATGTTCGTGGCTTGTCTGACATTGAGTGGGTGTCAGATAAGTTGGATAGAGGTCTAAACAGTGAGGACGATGATGCTACCATTCCCAAAACTTTGTTTCCCACATTTATTATGCCTAAAAGTTTGGGGGAATATAAATGGGAAGTAGGAACTTATTTCACTGACAAAAAGGAATTCACTGATGTAATTAGGACATATGCATTGAGTAATAGCAGAAATTTAAAATTGATTAAGAATGACAAGAAGAGGGTTACTGTAAAATGTTTGGGGGCCAATGGTAAATGCAAATGGTATGCTTATTGTGCGTATATGTGTCTTGAGAAGTCCTGGAAGTTAAGAAAAGTTATTGATGATCACACCTGTAGTAGAGATTTCAATGTGAAGTTGATAACTACCAAATGGTTGAGTGAAAGGATGGAAAAAACTATTAGAGAGAACCCTAATATTAAGGTCATGGACATTAGGGAGAAACTGAGTAGGAAATGGAATGTAGCAATCTCTAAAAATATGGCTTTTAGGGCAAAAACCATGGCAAAATATAGTGTTGAGGGCTCGTTTAAAGAACAATTCAGAAGACTCCATGATTATGGTCATGAGGTTCTGCAAAGAAATCCAGGATCAACAGTCCAAATAAAGATGTTTTTGAAAGGAAAGTATGGAAGGGAGTTACTAACAACAGTTGGAAGAGATGGAAATGAACAAATTCTGCCCATTGCATATGCTGTTGTTGAGGACCTTGGTGGGGAAGATGTAGCTTCATCATGCACATTCATTTCAGACCAGCAAAAGCAATATCCTGGAAAGGACCTTAAACGGCTCATGTGGAGTGCAGCAACGGCCACATGTCCACAACTAAGGGAGTCTGAAATGAGAAAAATTAAAGAGATCAATTTAGATGCATTTAAATATTTGATTGCAATTCCACCTAGGTGGTCATCAGACCAATTATTTGAAGTGATTCACATTTCACAATTTGGGGAGCAATTTGTTGTCAATCTTGACAACAAAGACTACAGTTGTAGAGGATGGTTAATCAGTGGCATTCCTTGCACTCATGCCATCACTGCATTGAAGTTCTTAAATTTAAATGCAGAAGAATACACTGCCCATTGGTTTAGGAAGTCTGCTTATGAAGAGACTTATAACAACATCATACATCCTATCAACGGACAACATATATATTACCTCCAAAGAAAATGGCAATGCCAGGAAGGCCTAAGAAAAAAACGAAGACTACAACCTTGGGAGTTGAAGAAGAATGACTTAAAATTAAGAAAGTGTGGGAGAAAAAAGACTTGTGCTGTCTGCAAACAACTGGGACACAACAAAAGATGTTGTCCACAACGACCTGTGCCTTCATCAAATGTCCCTGTTGACCAACCAACTCAGGAGTCTACTGTCACACATGTCCCTGCTAACCAACCAACTCAAGAGTCTATTGTCATACATGTCCCTGCTGACCAACAAACAAAAGTCACAGCACCTTCAACACATGTCCCTGCTGACCAACCAACTCAGGAGTCTACTGTCCTTCCTTCTCATCAATAA 4575 0.4164 MDTKTKTLTWVLLQVNAFLQSKAKGLLVLRSYGFGLCGVDRGGTRFLGDFVKEILISESLSVFFLMIPFSWVVFEYVYLKQASCKASNAFLYLVLIKDFLMGSPLNGLDSLAEVQNSISVADHDPPSTSGIPRPSRPPLSTSRNHGASSSQHNYGMKTIHHQKLSYQEADSVERDEMQNMEKQHYNTNGKSEYVSLNKAVESCLGKNISKMETKLSINQPLNASKNCDSSKGIVDGTKSNCQSEITFCPSPQNSFYSEAKESFGNTGVSECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRARDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLETKSSGYCIQPACIEPTCVIQPDCIQPSCFTPRFLSGKSKKEKKLKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGPANRATLFNVVGQPLKFPESPSVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRHAMKALAAEKLPGVKPSGIAFGKKKQTKTIITLRALKEGQNLRGASVVPDRLELLTDDRGVMHMLNIARLNDEVHLYVVHNNMEPDIIEMIDWVDGEVEAEVGSQMKEVEADGDADEVGRGLDEVDVEVELGTQMEEVQGDVDGDAAEVGREMEEAEGEVQPEVGTQREEVQGDVDADAAEADREMKEAEGEGEGDVEAEVGKQSVEEEEVHHAKEAKVHDVHDFELQDVHEDDDGDEGGHDGDEEAGQDAGDEYEDEDENVDDSISEESESLVDVRVECDIRTSKGQPCSPKGECSMTSDNDAVDDVRGLSDIEWVSDKLDRGLNSEDDDATIPKTLFPTFIMPKSLGEYKWEVGTYFTDKKEFTDVIRTYALSNSRNLKLIKNDKKRVTVKCLGANGKCKWYAYCAYMCLEKSWKLRKVIDDHTCSRDFNVKLITTKWLSERMEKTIRENPNIKVMDIREKLSRKWNVAISKNMAFRAKTMAKYSVEGSFKEQFRRLHDYGHEVLQRNPGSTVQIKMFLKGKYGRELLTTVGRDGNEQILPIAYAVVEDLGGEDVASSCTFISDQQKQYPGKDLKRLMWSAATATCPQLRESEMRKIKEINLDAFKYLIAIPPRWSSDQLFEVIHISQFGEQFVVNLDNKDYSCRGWLISGIPCTHAITALKFLNLNAEEYTAHWFRKSAYEETYNNIIHPINGQHIYYLQRKWQCQEGLRKKRRLQPWELKKNDLKLRKCGRKKTCAVCKQLGHNKRCCPQRPVPSSNVPVDQPTQESTVTHVPANQPTQESIVIHVPADQQTKVTAPSTHVPADQPTQESTVLPSHQ 1524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03791 1524 MobiDBLite consensus disorder prediction 855 978 - -
Vimu6g03791 1524 FunFam Serine/threonine-protein kinase D6PK-like 346 431 - -
Vimu6g03791 1524 MobiDBLite consensus disorder prediction 121 154 - -
Vimu6g03791 1524 MobiDBLite consensus disorder prediction 1498 1524 - -
Vimu6g03791 1524 SUPERFAMILY Protein kinase-like (PK-like) 326 704 IPR011009 -
Vimu6g03791 1524 ProSiteProfiles Zinc finger SWIM-type profile. 1338 1370 IPR007527 GO:0008270
Vimu6g03791 1524 ProSiteProfiles Protein kinase domain profile. 348 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g03791 1524 SMART serkin_6 348 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g03791 1524 Pfam Protein kinase domain 349 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g03791 1524 Pfam Protein kinase domain 582 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu6g03791 1524 FunFam serine/threonine-protein kinase D6PK-like 580 703 - -
Vimu6g03791 1524 CDD STKc_phototropin_like 346 703 - -
Vimu6g03791 1524 FunFam serine/threonine-protein kinase D6PK-like 432 499 - -
Vimu6g03791 1524 MobiDBLite consensus disorder prediction 933 972 - -
Vimu6g03791 1524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Vimu6g03791 1524 MobiDBLite consensus disorder prediction 855 932 - -
Vimu6g03791 1524 SMART 26again6 1345 1372 IPR006564 GO:0008270
Vimu6g03791 1524 Pfam MuDR family transposase 1054 1106 IPR004332 -
Vimu6g03791 1524 Gene3D Phosphorylase Kinase; domain 1 346 431 - -
Vimu6g03791 1524 PANTHER FLIPPASE KINASE 1-RELATED 173 708 - -
Vimu6g03791 1524 MobiDBLite consensus disorder prediction 134 154 - -
Vimu6g03791 1524 Gene3D Transferase(Phosphotransferase) domain 1 432 500 - -
Vimu6g03791 1524 Gene3D Transferase(Phosphotransferase) domain 1 579 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03791 Vimu-Chr6 36450435 36461331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03791 252 703 AGC Kinase Gene Family AT5G47750 74.179 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vimu6g03791 Pkinase 2.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03791 K08286 - gmx:100802402 1087.02