Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03771 ATGAGAGAGAGGTATTGTTACAAGGAAGTGCTTCCATTCACTGCAATGGTTGCCATAGAGTGCTCCAACGTTGGTGTGAACATTCTATTCAAAGCTGCAACTCAGAAGGGATTGAGTTATTATGCCTTCATCGCTTATTCATATCTCATCTCTGTTCTCTTTCTCCTTTTGCCTTTGCCCTTCGTCTTTCGATGGTCAAGAGGCCTTCCACCGCTCAACCTCTCTCTCATCTCCAGAATTTTCCTCCTTGGAGTAATTGGCAGAGTGACAGCTCAACTTTCTGGGTACAAGGGACTGAATTACACCTCGCCTACGCTTGCGTCTGCTCTCAGCAACCTCATACCAGCTTTCACCTTCATATTGGCTATCATTTTCAGGATGGAAAATGTAGCTTTAAGAAGCTCAAGCACTCAGGCCAAAATCCTGGGTTCGTTCGTATCCATATTAGGTGCACTCGTAGTTTTACTCTATAAGGGTTCCATAATCCTTTCAACTTCATCTGCAACACTATCTCCTACTCTTCGTTCTCCAATGGAATCTACATCACAAACAAATTGGGTTCTTGGTGGATCCCTACTTGCCATTGAGTATCTTTTGGTTCCAATATGGTACATTGTTCAGACCGATATTATGAAACAATACCCAGCAGAGTTTATCGTGGTGTTCCTGTACAACCTGAGCGGGACTCTGATATCTGCTCCAATTTGCATGCTCTTAGAAGAAAATTTGAGTGCTTGGAAGATAAATCCTGATGTAACATTGATGGCTATTGTATATTCGGGTTTCTTTTGCACAGGGCTAAGTAGTTTGGTTCACACTTGGGGCATTCATCTTAAAGGCCCAGTTTATGTTTCAATCTTTAAGCCTCTGTCCATTGTGGTTGCAGCCGTTTCGAGTGACATCTTCCTTGGTGATGCTCTGTATTTTGGAACTGTTGTTGGAGCAGTGATACTCTCGTTTGGATTTTATGCTGTGATATGGGGTAATGCAAAACAAGATGAATTGAGTGAGGACTTTGACATGCGTCCTTCATCAAGTAGTAAGAGTCCTTTGTTGCTGAGCTACAATGGGAAAGATAACGAAGAGACCACCCACTGTTGA 1101 0.4278 MRERYCYKEVLPFTAMVAIECSNVGVNILFKAATQKGLSYYAFIAYSYLISVLFLLLPLPFVFRWSRGLPPLNLSLISRIFLLGVIGRVTAQLSGYKGLNYTSPTLASALSNLIPAFTFILAIIFRMENVALRSSSTQAKILGSFVSILGALVVLLYKGSIILSTSSATLSPTLRSPMESTSQTNWVLGGSLLAIEYLLVPIWYIVQTDIMKQYPAEFIVVFLYNLSGTLISAPICMLLEENLSAWKINPDVTLMAIVYSGFFCTGLSSLVHTWGIHLKGPVYVSIFKPLSIVVAAVSSDIFLGDALYFGTVVGAVILSFGFYAVIWGNAKQDELSEDFDMRPSSSSKSPLLLSYNGKDNEETTHC 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03771 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Vimu6g03771 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 331 - -
Vimu6g03771 366 MobiDBLite consensus disorder prediction 338 366 - -
Vimu6g03771 366 MobiDBLite consensus disorder prediction 342 359 - -
Vimu6g03771 366 Pfam EamA-like transporter family 202 326 IPR000620 GO:0016020
Vimu6g03771 366 Pfam EamA-like transporter family 25 155 IPR000620 GO:0016020
Vimu6g03771 366 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03771 Vimu-Chr6 36230616 36236455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03771 4 360 Nodulin-like Gene Family AT5G40240 53.203 1.22e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03771 - - gmx:100805667 556.214