Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03757 ATGCAGGAGGGAGATTCTTATGATATGAGGAAAAAACTCCCATTTTGTGTGGGGCTTCTACTACGTTTGCTAAGGAAGAATCTTCGTGTTTTTGTTACTTGCACTTCTGGATTTGATCGATCTCCTGCTTGTGTGATTGCCTACCTACATTGGATGACGGATGTTTCCCTTCATGCAGCATATACTTGGGGTGAGGATGATGCTAACGTTGTCAAGGTGATTGAGAGGCCTTTGAATGAAAAGGAGCGGTTTATGCTGGCAAAAGCAGCTCGTTGTATTGCTTTTTCTATCAGTCCGATCACTTTGGCCCCCAAATAG 318 0.4371 MQEGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWGEDDANVVKVIERPLNEKERFMLAKAARCIAFSISPITLAPK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03757 105 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 2 63 - -
Vimu6g03757 105 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 6 63 IPR029021 -
Vimu6g03757 105 Gene3D Protein tyrosine phosphatase superfamily 1 95 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03757 1 63 Protein tyrosine phosphatase (PTP) family AT3G01510 77.778 7.82e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03757 - - gmx:100814503 127.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03757 6 36038475 36043504 Vimu6g03757 6 36038475 36043504 ECH