Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03755 TTCTCCGCCATAGCCACAACCTCAACCATGCTTGCAATGCAATTTGGCACGCGCCCTCACTACCCTCCTTCGCTGTTCCTTAGCAGCTCCAACGCTTGTTCATCCTCTCGCATCCTCTACAGCAACAGAAACAACCAGGTGTACCTTGTTCGCTCCAACGTTGGAACCCTCAACCTTAGAGTTTTCGCTGCGTCTGGCAACTCCTCATACAAGATGAACCTCAACGAGTACCTCGTCACTCTCGAGAAGCCCCTCGGCATTCGGTTCGCGCTAACCGCCGATGGCAAAATCATCGTCCACTCTCTCACTAAAGGGGGTAATGCAGAGAGGTCCAGGATAATTATGGTGGGTGATACTTTGAAGAAAGCTGGCGATTCGTCTCAGAACACTCTCGTTGAGATTAAAGACGTTGGAAATACACAGAAGGTGCTAAATGAGCAAACAAGTTCTTTTAGTTTGGTTCTTGAGAGGCCCACATCTCCTTTTCCTATTCAAGTACTGCACAAGATGAATGATCTCGAGATAGTCTTTAATAGAGGGCGAGTTCCTATTGTCACATGGAACAAGACCCTATTGGCATCAAATTTACAATCATCTAGTGAGAGCAGTGCGAATTCTGGATTTTTGATGTTCAACTCAAAGTTTCTCAAACCAAATGCAAACAAGTTATTGGGCAACCAAAATCAACGTACCATCACCCATGGTGAGAGAAACTTCTTTGCTGAACACACACCACAAATTGCTTGTGTTTTTACTGAAGAAGTGTGTGGAGATGGAGATTGGGGTCATGGAAGTTTCCCACTCGAGGAGTATATTCAGGCTCTAGATCGTTCCAAGGATGAGATGTATTATAACCACTCTCTTGGTATGCGTTATAGTAAGATTACAGAGCAAATATATGTGGGATCCTGTATACAAACAGAAGATGATGTAGAGACGTTGTCAAAAGTTGAGGGAATTACTGCTGTTCTGAACTTCCAAAGTGGAACTGAAGCCGAAAATTGGGGAATCAATGCAAAATCAATCAATGAATCTTGTCAAAGGAATAATATTCTCATGATCAACTATCCTATTCGGTAA 1080 0.4352 FSAIATTSTMLAMQFGTRPHYPPSLFLSSSNACSSSRILYSNRNNQVYLVRSNVGTLNLRVFAASGNSSYKMNLNEYLVTLEKPLGIRFALTADGKIIVHSLTKGGNAERSRIIMVGDTLKKAGDSSQNTLVEIKDVGNTQKVLNEQTSSFSLVLERPTSPFPIQVLHKMNDLEIVFNRGRVPIVTWNKTLLASNLQSSSESSANSGFLMFNSKFLKPNANKLLGNQNQRTITHGERNFFAEHTPQIACVFTEEVCGDGDWGHGSFPLEEYIQALDRSKDEMYYNHSLGMRYSKITEQIYVGSCIQTEDDVETLSKVEGITAVLNFQSGTEAENWGINAKSINESCQRNNILMINYPIR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03755 359 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 58 359 - -
Vimu6g03755 359 Gene3D Protein tyrosine phosphatase superfamily 276 359 IPR029021 -
Vimu6g03755 359 SUPERFAMILY PDZ domain-like 80 174 IPR036034 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03755 143 359 Protein tyrosine phosphatase (PTP) family AT3G01510 61.290 3.11e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03755 - - gmx:100814503 598.971