Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03671 ATGAAGGAGGGTGAGAACGTATTGGATCCGCAGCTATGGCACGCGTGTGTTGGTGGCATGGTTCAGATGCCCAAGGTGAACTCCAAAGTCTTCTACTTCCCACAGGGTCATGCAGAGCACGCCCACACGACCATTGATCTCAGGGTTCCGCCACACATTCTCTGCAACGTCGAAGCGGTGAAGTTCATGGTGGACCCGAAAACTGACGAGGTCTTCGCGAAACTGAGTCTAGTTCCTCTCAGAAACTCGGAACTCGGTCCCGACGCGGAGGGGGGTGCTGACGTGGCGGAGGCTTCGGAGAAGCCCGCGTCTTTCGCGAAGACTCTGATGAAGTCAGATGCCAACAATGGTGGCAGGTTTTCGGTGTCGCGGTACTGCGCAGAGACAATTTTTCCGCGGCTAGACTACTCGGCGGAGCCGCCGGTGCAGAAGGTGGTGGCGAAGGACGTGCAAGGGGAGACGTGGAGGTTCTGA 474 0.5738 MKEGENVLDPQLWHACVGGMVQMPKVNSKVFYFPQGHAEHAHTTIDLRVPPHILCNVEAVKFMVDPKTDEVFAKLSLVPLRNSELGPDAEGGADVAEASEKPASFAKTLMKSDANNGGRFSVSRYCAETIFPRLDYSAEPPVQKVVAKDVQGETWRF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03671 157 SUPERFAMILY DNA-binding pseudobarrel domain 101 157 IPR015300 -
Vimu6g03671 157 Gene3D - 103 157 IPR015300 -
Vimu6g03671 157 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 157 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03671 Vimu-Chr6 34468651 34469493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03671 3 157 B3 DNA Binding Superfamily AT2G28350 61.538 1.56e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03671 - - gmx:100810558 272.707