Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03665 ATGGCTTTCTCCGACTCTTCTTCTGGTCGCAACTCTCTCATCCCCTCCTTCCTATACTCCTCTTCCTCCAAGACGCTTCCTCTCCACCGTATGCTCCACTCCACCGCTGCAGCCGCCGCCGCCGCACCCTCGTCTCCGCCGGCAAACCTCGATGCCGGATCGCGCGGCTTCATGATTCCCTCTCCCAGCGAGTCACGCAAGATCGAGCTGTACTCGCCTGCCTTCTACGCCGCCTGTACTGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATCGACCCTGCTAAGTACAAGAACATCACATCTGGATTTGGGGTTTTGCTTAAGGAGCAGGGCATCAGGGGCTTTTTCCGTGGTTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTCGGATTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGTCCAGAGTATGCTAGCAAGTACAAGACTTTGATTTACCTTGCTGGTTCCGCTTCTGCTGAGGTTATTGCTGATGTTGCTCTTTGCCCCTTCGAGGCTGTGAAGGTCCGTGTCCAAACACAGCCTGGTTTTGCTAGGGGTTTGGCTGATGGGCTCCCAAAATTTGTGAAATCTGAAGGAACTTTGGGGCTGTACAAGGGAATAGTGCCTCTGTGGGGACGACAGATTCCATACACAATGATGAAATTTGCTTCATTTGAGACCATAGTGGAGCTGATCTATAAGCATGCCATTCCTACTCCAAAGAATGAGTGCAGCAAAAACCTGCAACTTGGTGTCAGTTTTGCAGGTGGATATATTGCTGGTGTGCTTTGTGCAATCGTGTCTCATCCTGCTGATAATCTTGTCTCTTTCCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGTGAGTGTCAGACTTGGAGCCATTGTTGCGGTGAGTAAGCTTGGTTTGTGGGGTCTCTTCACCCGTGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCCCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTTGGGCTGCCAACAACTGGTGGTCCTGCTCCTGCCGCTGCTCCAGCTCCAGCAAAGGCGTAA 1143 0.5092 MAFSDSSSGRNSLIPSFLYSSSSKTLPLHRMLHSTAAAAAAAPSSPPANLDAGSRGFMIPSPSESRKIELYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNITSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKNLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDVSVRLGAIVAVSKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPAKA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03665 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
Vimu6g03665 380 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 44 371 IPR044677 GO:0005315|GO:1990547
Vimu6g03665 380 Pfam Mitochondrial carrier protein 173 259 IPR018108 -
Vimu6g03665 380 Pfam Mitochondrial carrier protein 77 160 IPR018108 -
Vimu6g03665 380 Gene3D Mitochondrial carrier domain 74 361 IPR023395 -
Vimu6g03665 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 360 IPR018108 -
Vimu6g03665 380 FunFam Phosphate carrier protein, mitochondrial 74 361 - -
Vimu6g03665 380 SUPERFAMILY Mitochondrial carrier 77 356 IPR023395 -
Vimu6g03665 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 158 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03665 Vimu-Chr6 34414535 34418450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03665 7 380 Chloroplast and Mitochondria Gene Families AT5G14040 75.718 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03665 K15102 - gmx:548006 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03665 6 34414535 34418450 Vimu6g03665 6 34414535 34418450 ECH
Vimu6g03665 6 34414535 34418450 Vimu8g00307 8 8329135 8332792 PCT