Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03649 ATGGTTGTCTTTGAACGCCTGACTCACCTCTTCTTCGCCACAGAGTCCTCCCTCACTGCTACCCTTTTCTCCCAAACCACCCAGCCCTTCCACTCCTTCACCCTCTTCCTTCTAGATGCTTCTCCTAAACCCTTCGCCGTTTCAAGCGTGGACTCGAACCAGTTTTTCACACCCCTCACGAAGTACGTGAATCTGAGTATCCCCATTGAGGACCCCGAGCGAGAGACGTTCAAGATGACGAAGGATGTGATGGTTGTGGGGTTTGTGTTGTTCTTCTCGAACTACTCTACCTTTCTTGGGAAGCCAGGGTTTTATGTGGAGGATTTGTTCGTGAGAAAGTGTTACAGGAGACAGGGGTTTGGGAGAATACTTCTGTCGACGGTGGCGAATCAGGCGGAGAAGATGGGGTACGGGAGGGTGGAGTGGGTGGTGCTCGATTGGAATGTGAATGCGATTAAGTTTTATGAAGAGATGGGTACCGATCTCTTGAACGAGTGGAGGATTTGCAGGTTAACTAGAGAGGCTCTTCAGGCTTATGGAGGTGCCGATTAG 552 0.5054 MVVFERLTHLFFATESSLTATLFSQTTQPFHSFTLFLLDASPKPFAVSSVDSNQFFTPLTKYVNLSIPIEDPERETFKMTKDVMVVGFVLFFSNYSTFLGKPGFYVEDLFVRKCYRRQGFGRILLSTVANQAEKMGYGRVEWVVLDWNVNAIKFYEEMGTDLLNEWRICRLTREALQAYGGAD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03649 183 Gene3D - 1 182 - -
Vimu6g03649 183 PANTHER DIAMINE N-ACETYLTRANSFERASE 2 179 - -
Vimu6g03649 183 CDD NAT_SF 85 141 - -
Vimu6g03649 183 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 35 174 IPR000182 GO:0016747
Vimu6g03649 183 Pfam Acetyltransferase (GNAT) family 77 159 IPR000182 GO:0016747
Vimu6g03649 183 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 169 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03649 Vimu-Chr6 34215743 34216294 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu6g03649 Acetyltransf_1 7.7e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03649 K22883 - gmx:100782562 275.404