Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03625 ATGGAGAATAATAACAACGCTGGTGACACGCTACATCCTCCCGCTGCTAAACATGACGGTGCCGCCGCCCAAGCCAAACCGTTGTCCCCGACGCGGCATGATCAGGCGGGGGAGGACCATAAGAAAGAAGAAGCCGCCGCGTCTACTCCGACAAGCCTCGAGAAACTTGCTCAAGAGATTGACCAATTCTCGAGGAGACTAAAAAACGATGGAAATGCGCACAACTTTGAGATTCCTGACTTCGCTGAGAGATACTTGGATCTCGTGGAAGAGAAGATAATGAAATACGACGCGGGTGAAGGTAAACCTAGATGGGGTGAGGTGTCGGAGGAAGATTCGTGGTTGTTGAACAACTCGAACAGGTTTTCAAAACTGATGACATTGGTGACTGGTAATTATCCTGATCATGAACCGGAGAAGATCAGCGGTGCACAAGTCTCGATGATGAACCGCATTTCCTCAATCCACCAACGTTTGATGACGTATTTGGAGGAGGACTTCCGGTTTCTGATTGAAGAATCAAGAATCCCAACCGAATTGGATCCCGGAGGATATAATCAGAACAGCATCGATACCAAAGGAAAACAACACATGGCGGCATTTGAACAACAACAAGAGGTGGCGCAAGTACAAGATGGTTTGGAACAAGACACGAATTTCCCGGGGTACTCGGAGGAGACAATTGCCAGCCTAAGTAAGATCGCCAGCGAGATGATATTCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCATCTCGCGGAGGAACGCCTTCGAGGAGATTAACCAGAAGTTAGCGTTAGAGAAAATCAGCATCGACGAGATGGTAACGAAGGTGCAGTGGGAGACTATGGCCAGGGACATGATCCCTGCCTGGATCAACACGCTCAAGCAGTACGCGGCAGTGTACTTCCCCGGCGAGCGAAAGCTGACCGAGGCTGTGTTCGCAAACAACCACGCCGTGGCGGCGGTACTCTTCAGCAGCCTCTCCCGCGGCGTTGTGATTCAGCTTCTCAACTTCGCGGAGGGCGCCGCCATGACGAAGCGAGCCGGAGAGAAGCTCTTCAAGCTCCTGGACATGTACGAGAGTCTCTGCCAGGTGATCTCCAACGTGGCCAGACTCTTTCCAGAAGAGTCCATCGAGGAGATAAAGACAGAGATGAACCTTGCCAAGTCCAGACTTGGGGAGGCATCCATCCACATCTTCTGTGACCTGGAGAACCAGATTAAATCGGAGACAGCGAAAAGCGCCGTCCCCGGTGGCGCAGTGCACCCCCTCACACGCTACATCATGAACTATCTAAACATAGCAGGGGACTACAAGGAAACCCTTGAGCAGGTTTTCAGGGAGCACACGAAGAGGGACCGTTCGGGTTCCACAAGCAAGAATTCAGAGCAGAAGAATGAGGGATCTTGGGACAAGGAAACACCATCTCCATTCGCAAAACAGACGTTGAGGGTGATGGACCTGCTAGACTCGAGCCTGGAGGGGAAGGCGCGTCTGTACAAAGAGGTGGCGCTTAGCAACTTCTTCATGATGAACAATGGGAGGTACATTCTGCAGAAGATAAAGAGTTCTAAGGAGATGAGCAAGGTGATGGGCGACAACTGGATCAGGAAGAAGTCCTCGGACCTGAGAAACTACCACAAGAACTACCAGAGGGAGACGTGGAACAGGGTGCTGCAGTGTCTGAACCACGAAGGGTTGACCGTGAATGGGAAGGTTCACAAGCCTGTGCTGAAGGAGAGGTTCAAGAGCTTCAACTCTTTGTTCGACGACATTCACAAGACGCAGAGTTCGTGGGTAGTGAAGGACGAGCAGCTGCAGTCGGAGCTGAGGGTTTCCATCTCTGCAGTGATTATCCCTGCGTACCGATCATTCGTTGCGAGGTTTGCCCAGACTTTTGACCCGGGGAGACAGACAGAGAAGTATATAAAGTACCAAGCTGAAGACATTGAGACTTACATTGATGAGTTGTTTGAAGGGAAGCCTCACCAGTCAATCGGAAAAAGGAGAACATAA 2025 0.5121 MENNNNAGDTLHPPAAKHDGAAAQAKPLSPTRHDQAGEDHKKEEAAASTPTSLEKLAQEIDQFSRRLKNDGNAHNFEIPDFAERYLDLVEEKIMKYDAGEGKPRWGEVSEEDSWLLNNSNRFSKLMTLVTGNYPDHEPEKISGAQVSMMNRISSIHQRLMTYLEEDFRFLIEESRIPTELDPGGYNQNSIDTKGKQHMAAFEQQQEVAQVQDGLEQDTNFPGYSEETIASLSKIASEMIFGGYESECCQVYIISRRNAFEEINQKLALEKISIDEMVTKVQWETMARDMIPAWINTLKQYAAVYFPGERKLTEAVFANNHAVAAVLFSSLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMYESLCQVISNVARLFPEESIEEIKTEMNLAKSRLGEASIHIFCDLENQIKSETAKSAVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFREHTKRDRSGSTSKNSEQKNEGSWDKETPSPFAKQTLRVMDLLDSSLEGKARLYKEVALSNFFMMNNGRYILQKIKSSKEMSKVMGDNWIRKKSSDLRNYHKNYQRETWNRVLQCLNHEGLTVNGKVHKPVLKERFKSFNSLFDDIHKTQSSWVVKDEQLQSELRVSISAVIIPAYRSFVARFAQTFDPGRQTEKYIKYQAEDIETYIDELFEGKPHQSIGKRRT 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03625 674 MobiDBLite consensus disorder prediction 1 53 - -
Vimu6g03625 674 SUPERFAMILY Cullin repeat-like 146 662 IPR016159 -
Vimu6g03625 674 Pfam Exo70 exocyst complex subunit 292 659 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu6g03625 674 Gene3D Exocyst complex component Exo70 116 670 - -
Vimu6g03625 674 MobiDBLite consensus disorder prediction 452 479 - -
Vimu6g03625 674 Coils Coil 53 73 - -
Vimu6g03625 674 MobiDBLite consensus disorder prediction 452 473 - -
Vimu6g03625 674 PANTHER EXOCYST COMPLEX PROTEIN EXO70 83 663 IPR004140 GO:0000145|GO:0006887
Vimu6g03625 674 MobiDBLite consensus disorder prediction 32 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03625 Vimu-Chr6 33940401 33942896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03625 44 674 EXO70 exocyst subunit family AT5G13990 48.160 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03625 K07195 - gmx:100820172 916.376