Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03618 GCTGATATGGAAATGGCTAATGAAAATGGTTTCCAGCTTAGTGTGAAGCTAGGTGAACCAACTCTTGTTCCACCAGCTGAAGAAACAAAGAAGGGTTTGTATTTTCTATCTAACCTTGACCAGAACATTGCGGTGATTGTGAGAACTGTTTATTGCTTTAAAACTGCTGAGAGGGGGAATGAGAAAGCTGGGGAAGTTATAAAGAATGCATTGAAGAAGGTTCTTGTCCACTATTACCCTCTTGCTGGGAGACTCACTATAAGCTCAGAGGGTAAACTCATAGTGGATTGCACAGGGGAAGGTGCCTTGTTTGTGGAGGCTGAAGCAAACTGTTCAATGGAAGAGATTGGTGACATCACAAAGCCTGACCCTGGAACTCTTGGTAAGCTGGTTTATGATATTCCTGGAGCAAAACACATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACCAAATTCAAATGTGGAGGCTTTGCTCTTGGGCTGTGCATGAACCACTGCATGTTTGATGGCATTGGTGCAATGGAGTTTGTGAACTCTTGGGGACAAGTAGCCAGAGACTTGCCACTCTTAATCCCTCCAGTGCTTGACAGAAGCGTACTCAAGGCAAGAAACCCACCAAAGATAGAGCACATGCATCAAGAATTTGCTGACATAGAAGACAAATCAAACACTTCTAGTTTATACGAAGATGAAATGGTTTACAGGTCCTTCTGTTTTGACCCTGAGAAACTAAAGGAGCTGAAGATGAAAGCAATGCAAGATGGGGCTCTTGATGCATGCACAACATTTGAAGTCCTTTCAGCGTTTGTGTGGATAGCAAGAACCAAGGCACTGAAAATGTTACCTGAGCAACAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCCAAGTTCAACCCTCCTCTTTCAAAAGGGTACTTTGGAAATGGAATTGTGCTAACAAATTCTGTGTGCCAAGCTGGGGAACTGACACAAAAGCCTTTGTCATTTGCTGTGGGGCTCATTCAAGATGCTATCAAGATGGTAACAGACAGCTACATGAGATCAGCCATTGATTACTTTGAGGTGACAAGAACAAGGCCTTCCCTTGCTTGCACTCTTCTGATCACAACTTGGTCTAGACTTTCCTTTCACACCACAGATTTTGGATGGGGAGACCCAGTGCTGTCAGGGCCAGTCTCACTGCCAGAGAAGGAAGTCATCTTGTTCCTCTCCCATGGCCAAGAGCGAAGAAATATAAATGTGCTTCTGGGTTTGCCTTCTACTGTCATGAAGATTTTCCAAGAATTGATGCAGATATAA 1305 0.4391 ADMEMANENGFQLSVKLGEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTAERGNEKAGEVIKNALKKVLVHYYPLAGRLTISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGQVARDLPLLIPPVLDRSVLKARNPPKIEHMHQEFADIEDKSNTSSLYEDEMVYRSFCFDPEKLKELKMKAMQDGALDACTTFEVLSAFVWIARTKALKMLPEQQTKLLFAVDGRAKFNPPLSKGYFGNGIVLTNSVCQAGELTQKPLSFAVGLIQDAIKMVTDSYMRSAIDYFEVTRTRPSLACTLLITTWSRLSFHTTDFGWGDPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPSTVMKIFQELMQI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03618 434 FunFam Tryptamine hydroxycinnamoyl transferase 220 433 - -
Vimu6g03618 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 431 - -
Vimu6g03618 434 Gene3D - 216 433 IPR023213 -
Vimu6g03618 434 FunFam Spermidine hydroxycinnamoyl transferase 13 216 - -
Vimu6g03618 434 Gene3D - 10 215 IPR023213 -
Vimu6g03618 434 Pfam Transferase family 15 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03618 Vimu-Chr6 33819441 33821182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03618 13 432 Monolignol Biosynthesis Gene Families AT5G48930 34.028 1.03e-81 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03618 K15400 - gmx:100804504 816.994