Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03590 ATGGGGGTCTTACAGGAGAAGCTATCCTCGTTCTATAAGAGCCGGTGGCTTGTGTTCGTCGCCGCAATGTGGTTGCAGTCATGGGCGGGTATCGGCTACCTCTTCGGGAGCATATCGCCCGTAATCAAGAGCTCCCTCGGTTACAACCAGAAGCAGCTCGCCATGTTGGGTGTCGCTAAGGACCTCGGTGACGCCGTCGGCTTCGTGACGGGGCTGCTCTGTGAGTTGTTACCTATCTGGGGTGCTCTTCTTGTGGGTGCTGCTTTGAATCTCATAGGTTACGGCTGGGTCTGGTTGATTGTAACTGCTCAAGTTCCAGTTTTGCCTTTGTGGGCCGTGAGTTTCTCTGTTCTTTTTGTTCTTCTTCCTTGTTTGGATTTTTACTTCTTTCCCATTTTGGAATATGATGGTGATCAGGGTTTAATGTTAACATGTGGTCGCAATAAATGGCTGTTTGATTGTTTGTTGAACTTGAAAAGTGAGAGGACGCGGTTGTTGGCAGAATCGAATAGCTTTATGTGTGTTCTTATCTTTGTGGGAACAAATGGTGAAACCTACTTTAACACAGTTTCTCTGGTGTCTTGTGTACAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTGGGAATCCTAAAGGGCTTCGCAGGGTTGAGTGGTGCAATCTTGACACAGATATATGTATTGTTCCATGCCCCTGATCACGCATCATTAATATTTATGGTTGCTGTTGGTCCTGCATTGGTAGGAATAGGTCTTATGTTCCTTGTTAGGCCTGTTGGGGGTCACAAACAAGTCCGGCCAACAGATGGAAAATGCTTCACATTTGTGTATGGTGTGTGCCTCCTCTTGGCTGTTTATTTGTTGGGAGTTATGCTTGTCCAAGATCTAGTTCCAGTGAGTGAAACTGTAGAATCTGTATTCACAGTTATTCTCTTGCTGATACTTGTTATCCCAATTGTTATTCCCATTATGTTGAGTTTTGGCCCTGAGCCAAGAAATCCAGAAGAAGAGTTCCTTCTTCCAGAACCACATAATAAAGAACCAGGGAAGTCTCAGTTGGATTCTGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATCAGAGAGGCAGAAACGTATAGCACACTTACAACAAAGACTGCTCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGGAGGAGGGGACCACACAGAGGGGAAGACTTCACCTTGACACAAGCATTAATCAAAGCAGACTTTTGGCTTCTTTTCATTTCAATGATAATGGGTTCTGGATCCGGGTTGACTGTAATTGACAATCTGGGTCAGATGAGCCAATCTCTAGGATATGACAATGCACATATATTTGTCTCCATGATCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGAGGTTACATATCTGAGCTTGTTGTAAGAGATTATGCATATCCAAGACCAATTGCGTTGGCTGTATTTCAACTCATTATGACTGTTGGACATCTTTTCATTGGTATGGGATGGCCAGGGGCAATGCATGTTGGCACGTTACTGGTTGGACTTGGTTACGGGGCTCATTGGGCAATTGTTCCTGCCACTGCCTCAGAGTTGTTTGGTCTCAGAAACTTTGGTGCACTGTACAATTTCATCACTCTGGCAAACCCTGCAGGAACACTGGTCTTCTCTAGTCTCATTGCCAGCACCATCTACGATTCTGAAGCAGAGAAACAACACCCACAAAGTATGGGATCACTGTTGTTGCATTTGCCAAATGTTGCTGCTGAGTCTCTCAAGTGTGAAGGAAGTGTATGCTTTTTCCTAACTTCCATGATCATGGCAGGATTGTGCGTAGTTGCAGCAGGGCTATGCACGGTTCTAGTGTTAAGAACAAGGATTGTTTATGCCAACCTATATGGAAAAACTTCTTCTAGTAGACTTCGATTATGA 1956 0.4514 MGVLQEKLSSFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDAVGFVTGLLCELLPIWGALLVGAALNLIGYGWVWLIVTAQVPVLPLWAVSFSVLFVLLPCLDFYFFPILEYDGDQGLMLTCGRNKWLFDCLLNLKSERTRLLAESNSFMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYVLFHAPDHASLIFMVAVGPALVGIGLMFLVRPVGGHKQVRPTDGKCFTFVYGVCLLLAVYLLGVMLVQDLVPVSETVESVFTVILLLILVIPIVIPIMLSFGPEPRNPEEEFLLPEPHNKEPGKSQLDSDEVILSELEDEKPKEVDMLPASERQKRIAHLQQRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISELVVRDYAYPRPIALAVFQLIMTVGHLFIGMGWPGAMHVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLVFSSLIASTIYDSEAEKQHPQSMGSLLLHLPNVAAESLKCEGSVCFFLTSMIMAGLCVVAAGLCTVLVLRTRIVYANLYGKTSSSRLRL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03590 651 Pfam Nodulin-like 171 322 IPR010658 -
Vimu6g03590 651 Pfam Nodulin-like 15 117 IPR010658 -
Vimu6g03590 651 SUPERFAMILY MFS general substrate transporter 273 634 IPR036259 -
Vimu6g03590 651 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 638 - -
Vimu6g03590 651 Gene3D MFS general substrate transporter like domains 269 635 IPR036259 -
Vimu6g03590 651 CDD MFS_Mch1p_like 14 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03590 Vimu-Chr6 33247017 33250372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03590 173 646 Nodulin-like Gene Family AT5G14120 70.021 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03590 - - gmx:100818484 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03590 6 33247017 33250372 Vimu6g03590 6 33247017 33250372 ECH