Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03508 ATGGAACCAGAATCTGGAACTTCCGCTTCTCGGAATCCTTCTCAGTTGTCCTGGGTGAATCTCTCTCGGAATCTAATATTAGCATATCAAAGCTTTGGTGTGGTGTACGGGGATCTGAGCACTTCACCTCTCTATGTGTTCACGAGCGCGTTCAGGGGAAAGTTACTGGATCACCATGATGAAGAAACAATATTTGGCACTTTTTCGTTGATTTTTTGGACCCTTACTCTGATTCCGTTGCTTAAATATGTATTCATCTTATTGAGTGCTGATGACAACGGGGAAGGTGGAACATTTGCTCTTTATTCTCTGCTCTGCAGACATGCCAAGTTTAACTTACTCCCCAATCAACAAGCAGCTGATGAGGAGCTATCATCCTATAAATATGGCCCATCTTCACAGGCTGCAGCCTCTTCTCCGTTGAAGAGGTTTCTAGAGAAACATAAAAGGTTAAGAACAGCCCTGCTTGTTGTGGTACTGTTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTTACTCCAGCAATTTCAGAAGATATTAACAAGAAGCTAACCCCTGATTCTTTCTCTGCAGTTCTAGCATCAGTATCAGGATTAAAAGTGACAGAAAAGAAATTAACAGATGGTGAACTTGTCCTGCTTGCCTGTGTCATATTGGTTGGACTGTTTGCTCTCCAACATTGTGGCACGCACAAAGTAGCATTTATGTTTGCTCCAATTGTAATCATCTGGCTTGTATCAATATTTTCTGTTGGGCTGTATAATACAATTCATTGGAATCCACAAATAGTCCGTGCTATATCACCATATTATATCATAAAGTTTTTTAGCAAGACTGGTAAAGAAGGTTGGGTTTCTCTTGGAGGGATACTTCTCTGTATCACTGACGCTGAGACTTTTAAAACTCAGATGCTAGAGTTCGCCAACTGCTTACCTTATTCTTTTGCCCCCTCTCCAGGAACTGAAGCTATGTATGCAGATCTTGGTCATTTCACTGCTTCGTCAATAAGGCTTGCATTTGCGTTTGTTATATACCCATGTTTGGTAGTACAGTACATGGGCCAAGCTGCTTTCCTATCTAAAAACCTCAACTCTGTTGATAACAGTTTTTATGACTCGATACCTGAACCTGTATTTTGGCCTGTTTTTGTTATTGCCACCCTTGCTGCAATTGTTGGGAGTCAAGCTGTTATAACTGCAACTTTCTCAATCATCAAGCAGTGTCATGCACTTGGACTTGCTTGTATGACAGTTATGTTTGTAACTACATTTCTGATGACACTAGTCGCAATCTTTGTCTGGCAGAAAAGTGTATTCATTGCTATAGCATTTCTTTTATTCTTTTGGGTGATAGAGGGAGTATATCTATCAGCAGCATTCATCAAAGTGCCTCAGGGAGGATGGGTTCCTCTTGTCTTATCGTTCTTCTTCATGGCTGTTATGTACGTGTGGCATTATGGAACTCGTCGGAAGTACAGCTATGATCTGCACAACAAAGTTTCATTGAAATGGTTACTGGGCTTGGGTCCGAGCCTTGGCATTGTTCGTGTCCCAGGGATTGGTCTCATCTACACCGAACTAGCTACCGGAATACCTGCTATATTTTCCCATTTTGTAACAAACCTTCCTGCATTTCACAGGGTGCTAGTTTTTGTTTGTGTAAAATCAGTTCCTGTTCCATATGTTTCACCTGAAGAACGTTTCCTTATCGGGCGAGTTTGTCCCAGACCATATCGAATGTATAGGTGTATTGTCAGATATGGTTACAAGGACATTCAAAGGGATGATGGAGATTTTGAGAATCATCTTATACAGAGTATAGCAGAATTTATCCAAATGGAAGCAGTGGAACCCCAGTTTTCAAGTTCTGAAGGTTCTTCACTTGATGGGAGGATGGCTGTTATAAGTTCTAGAAACTTAGATTGTGCTTCAAGTTTAATTGTTTCAGAGCAAGAGGATATTGGCGTGGACATATCCATCCCTAGCAGCAGATCTGTAACCCTAAGAAGTTTGCAATCGGTCTATGATGATGAAAGCCCACAAGTTAGAAGGCGACGAGTAAGATTTCAACTACCAGAAAATCCTGGCATGAATGCAGATGTCAAGGAAGAGCTTTTGGATTTAATTCAAGCCAAGGACGCTGGGGTTGCATATATCATGGGGCACTCGTATGTGAAGGCAAGGAAATCATCCTCATTCTTGAAAAAACTTGTGATTGATATTGGCTACTCATTTCTGCGGAAGAATTGCAGGGGTCCAGCTGTAGCTCTTAACATTCCTCACATTAGTCTTATCGAAGTTGGAATGATATATTATGTGTAG 2322 0.4134 MEPESGTSASRNPSQLSWVNLSRNLILAYQSFGVVYGDLSTSPLYVFTSAFRGKLLDHHDEETIFGTFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAAASSPLKRFLEKHKRLRTALLVVVLFGACMVIGDGVLTPAISEDINKKLTPDSFSAVLASVSGLKVTEKKLTDGELVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSVGLYNTIHWNPQIVRAISPYYIIKFFSKTGKEGWVSLGGILLCITDAETFKTQMLEFANCLPYSFAPSPGTEAMYADLGHFTASSIRLAFAFVIYPCLVVQYMGQAAFLSKNLNSVDNSFYDSIPEPVFWPVFVIATLAAIVGSQAVITATFSIIKQCHALGLACMTVMFVTTFLMTLVAIFVWQKSVFIAIAFLLFFWVIEGVYLSAAFIKVPQGGWVPLVLSFFFMAVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYTELATGIPAIFSHFVTNLPAFHRVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQMEAVEPQFSSSEGSSLDGRMAVISSRNLDCASSLIVSEQEDIGVDISIPSSRSVTLRSLQSVYDDESPQVRRRRVRFQLPENPGMNADVKEELLDLIQAKDAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03508 773 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 412 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu6g03508 773 Pfam K+ potassium transporter 409 591 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu6g03508 773 Pfam K+ potassium transporter 29 304 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03508 Vimu-Chr6 32032977 32037142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03508 1 773 Inorganic Solute Cotransporters AT3G02050 69.891 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03508 K03549 - gmx:100790329 1339.71