Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03482 ATGAGTTGTGAACAGGCAGTTGGTGCTGCTGGTGGTGCAATGGCAATTATGGAAGTGGTTCCTCAAAAGTATAGGCATATGATTGGAGGTCCTTCTCTGAAAGTGGATTTGCACACTGGGGCTGTTGTTGAAGGGGCGTTGACCTTTTTTATCACCTTTATCGTTCTTTTCATCTTCCTCAAGGGCCCTCGTAGTGATTTGTTGAAGATCTGGTTTCTGGCCACAGCAACTGTAGTTTTGGTCATGGTTGGATCTGCCTACACTGGCCCAGCCATGAATCCTGCCAATGGTGATTTGAATGATTATTTTGAAAAACCACTTAATTTTGACCTCAAGATTGTATTGGCTTTTGGTTGGGCTTACTTAAACAATTGGCACAACACATGGGACCAATTGTATGTATACTGGATTTGCCCCTTTGCCGGAGCAATATTGGCTGCATGGTTGTTCCGTGCAATCTTTCCCCCACCACCACCACCAGAACTCAAACAAAAGAAAGCATGA 504 0.4444 MSCEQAVGAAGGAMAIMEVVPQKYRHMIGGPSLKVDLHTGAVVEGALTFFITFIVLFIFLKGPRSDLLKIWFLATATVVLVMVGSAYTGPAMNPANGDLNDYFEKPLNFDLKIVLAFGWAYLNNWHNTWDQLYVYWICPFAGAILAAWLFRAIFPPPPPPELKQKKA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03482 167 Gene3D Glycerol uptake facilitator protein. 2 158 IPR023271 -
Vimu6g03482 167 SUPERFAMILY Aquaporin-like 5 161 IPR023271 -
Vimu6g03482 167 PANTHER AQUAPORIN SIP1-1 115 166 IPR044222 GO:0015250
Vimu6g03482 167 Pfam Major intrinsic protein 4 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03482 Vimu-Chr6 31679563 31683629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03482 17 154 Major Intrinsic Protein MIP AT3G04090 55.072 1.53e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03482 K09875 - gmx:100792787 241.121