Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03479 TTGAAGGCTCCGCCCGCCGCCGCCTCCTCCAACGGTCAGATCCGGTACAGGTCGCCGTCCTCGGCTGAGCTCTTTGACGGCCAGGCCAGCAGCAATTCCCCGCCCTCGCACGCCGCCGATCAGCACTCGCAAGAGTTCGAGTCTAGCAAAATGCTGAAGCGCATCGGCCGCCAGGAGTCACTCGCCGACAAGATCTACCGGTTCCGAGGGACTCTGCTTGTTATCGCGATCCCACTTCTTCTCATTGTGTTCGTCCTCTACGTCATGCCGTCCAGCACCTCCAACGAGTCCGCCGGAGACTACGCTCTCGTCAACCGCAAAATGTCCCCCAACAAGAAATCCGGAGCCTCCTACGCCGTCATCTTTGACGCTGGCAGCTCCGGCAGCCGTGTCCACGTCTTCCATTTCGATCAAAACCTAGATCTCGTTCACATTGGCAAAGATCTCGAGCTTTTCGTTCAGCTTAAACCGGGTTTGAGTGCGTACGCTCAAGATCCGAAAAAGGCAGCAGAATCTTTGGTTCCGCTTCTGGATAAAGCTGAGAATGTTGTTCCTCGTGAATTGCGATCCAAGACAATAGTTCGAGTTGGGGCAACTGCGGGTTTGAGGGCATTGGAAGGAGATGCATCAGATAGGATCTTGCAAGCGGTGGCTATTTATGTAAGGGATTTGCTTAAGGACAAGAGTAGCCTGAGATCTGAAACTGATGGAGTTACAGTGCTGGATGGAACACAAGAAGGTGCTTATCAATGGGTGACGATCAACTATCTATTAGGAAATTTGGGAAAAGATTATTCAAAGACTGTCGGAGTTGTTGATCTTGGTGGTGGATCTGTTCAAATGGCTTATGCCATCTCAGAGACAGAGGCTGCCATGGCTCCGAAAGTAGCAGATGGACAGGATCCATATGTCAGAGAGATGTTCCTGAGGGGAAGGAAATACTACGTCTATGTTCACAGACTTTTACATGTTACTTTCAGTTACCTGCGCTATGGTTTACTAGCTGCTCGTGCAGAGATTTTAAAGGTTACTGATGATGCTGAAAACCCTTGTATCTTATCTGGCTATGATGGGTCCTATCCGTATGGGGGAAAGTCGTTTAAGGCTTCATCTTCCTCATCAGGAGCAAACATAAATGAATGCAAAAGTGTTGCTCTTAAGGCTCTCAAAGTTAACGAGATAGCATGTACTTATATGAAGTGTACTTTTGGTGGAATATGGAATGGTGGAGGGGGGGATGGGCAGAAGAATCTTTTTGTTGCATCTTTTTTCTTTGACCGCGCTGCTGAGGCTGGTTTTGCCGATCCAAACTTGCCAGTTGCGATAGTTCGTCCAGCAGATTTTGAGGATGCAGCTAAGCGAGCATGTCAAACAAAACTTGAGAATGCCAAATCAACTTATCCAAATGTTGAGGAGGGGAACCTTCCTTATCTTTGCATGGATCTCGTATACCAGTATACACTGCTTGTTGATGGGTTTGGCATATATCCATGGCAAGAAGTTACGCTGGTGAAGAAAGTTAAATATGATGATGCCCTCGTTGAGGCAGCATGGCCCCTTGGGAGCGCCATTGAAGCTGTATCATCTACGTAG 1593 0.4852 MKAPPAAASSNGQIRYRSPSSAELFDGQASSNSPPSHAADQHSQEFESSKMLKRIGRQESLADKIYRFRGTLLVIAIPLLLIVFVLYVMPSSTSNESAGDYALVNRKMSPNKKSGASYAVIFDAGSSGSRVHVFHFDQNLDLVHIGKDLELFVQLKPGLSAYAQDPKKAAESLVPLLDKAENVVPRELRSKTIVRVGATAGLRALEGDASDRILQAVAIYVRDLLKDKSSLRSETDGVTVLDGTQEGAYQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISETEAAMAPKVADGQDPYVREMFLRGRKYYVYVHRLLHVTFSYLRYGLLAARAEILKVTDDAENPCILSGYDGSYPYGGKSFKASSSSSGANINECKSVALKALKVNEIACTYMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPVAIVRPADFEDAAKRACQTKLENAKSTYPNVEEGNLPYLCMDLVYQYTLLVDGFGIYPWQEVTLVKKVKYDDALVEAAWPLGSAIEAVSST 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03479 530 CDD NBD_sugar-kinase_HSP70_actin 120 283 - -
Vimu6g03479 530 MobiDBLite consensus disorder prediction 21 42 - -
Vimu6g03479 530 Gene3D Exopolyphosphatase. Domain 2 242 508 - -
Vimu6g03479 530 Gene3D - 118 524 - -
Vimu6g03479 530 FunFam Apyrase 1 242 508 - -
Vimu6g03479 530 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 62 529 IPR000407 GO:0016787
Vimu6g03479 530 Pfam GDA1/CD39 (nucleoside phosphatase) family 114 529 IPR000407 GO:0016787
Vimu6g03479 530 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 241 256 IPR000407 GO:0016787
Vimu6g03479 530 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03479 Vimu-Chr6 31652755 31660631 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03479 53 529 Calmodulin-binding Proteins AT3G04080 67.715 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03479 K14641 - gmx:100786073 810.831