Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03473 TTGACTGGTTTGAGAATGGTTTTGGTGTGGTCAAGAAAAGGGACAAAGAAAATGGACTTAACCCTCTTTTCACTTCTATTATTGTTACTATTGCCTGCACTCTCTTCTTCCATATATGTTGGGAACAATATCTTTTTCAATCATCGCAAGATATTCCCCAAACAACAAGAACTTACTTCCTACGCTGTGACCTTTGATGCTGGTAGCACTGGTAGCCGTGTGCATGTCTTTCATTTCGACCAGAACTTAAATCTTCTTCACATAGGCAACGAGATTGAGTTCTATGATCAGGTGACACCTGGTTTGAGTGCATATGCTGATAATCCTGAAAATGCAGCAAAATCTCTGCTTCCACTTTTGGAGGAAGCTGAAAGTGTTGTCCCTCAGCACCTCTACCCCACCACACCAGTTAAACTTGGGGCGACTGCAGGTCTAAGACTTTTGGAAGGGGATGCTTCTGAAAGGATATTGCAAGCGGTTAGGGATTTGCTCAAGAACAGAAGTACCTTCAGCGTTCAACCAGATGCTGTAGCTATAATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAATAAATTATTTACTAGGGAATTTGGGAGAGAATTTTCCAAAGACAGTGGGAGTAGCTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCTGTCTCAGAGAACACAGCAAACAATGCTCCACAACCAGCAGAAGGAGAGGAACCTTACATAAAGAAACTTGTCCTCAAGGGAAAGAAATATGACCTCTATGTTCACAGTTACTTGCGCTATGGTAGAGAGGCATTTCGTGCTGAGGTTTTGAAGGTCACTGATGGTTCTGCTAACCCTTGTATTTTATATGGCTTTGATGGGACCTACACATATTCTGGAGAAGACTATAAGGCCTTTGCTCCCATTTCTGGGTCCAACTACCATGAATGCAGAAAGATAGTTCTTCAAGCTCTCAAAGTGAACCAGTTTTGCCCCCACCAAAATTGTAGTTTTGGAGGGATATGGGATGGTGGAAAGGGAAGTGGACAAAACATTCTTTTCGGCACTTCATCTTTCTATTATCTGCCTTCGGAGATTGGTATGTTTAGTCCAAATAAACCCAACTCCAAGATTCATTATTTGGATTTGAAGACTGAAGCAAAGATAGCTTGTGAAACAACATTTGAGGATGCCAAATACACTTATCCACTTCTTGCAGCTGATAGAGTTCCATATGTATGCCTGGACCTTACATACCAATATGCATTGTTTACTGATGGATTTGGCTTAGATCCATTGCAAGAGATCACAGTAGCAAATAAAATTGAATATCAGGATGCACTTGTGGACGCAGCGTGGCCTTTAGGCATTGCCATAGAAGCCACATCTTCATTGCCTAAATTTGATCCATTCATGTATTTTATTTAA 1416 0.4131 MTGLRMVLVWSRKGTKKMDLTLFSLLLLLLLPALSSSIYVGNNIFFNHRKIFPKQQELTSYAVTFDAGSTGSRVHVFHFDQNLNLLHIGNEIEFYDQVTPGLSAYADNPENAAKSLLPLLEEAESVVPQHLYPTTPVKLGATAGLRLLEGDASERILQAVRDLLKNRSTFSVQPDAVAIIDGTQEGSYLWVTINYLLGNLGENFPKTVGVADLGGGSVQMAYAVSENTANNAPQPAEGEEPYIKKLVLKGKKYDLYVHSYLRYGREAFRAEVLKVTDGSANPCILYGFDGTYTYSGEDYKAFAPISGSNYHECRKIVLQALKVNQFCPHQNCSFGGIWDGGKGSGQNILFGTSSFYYLPSEIGMFSPNKPNSKIHYLDLKTEAKIACETTFEDAKYTYPLLAADRVPYVCLDLTYQYALFTDGFGLDPLQEITVANKIEYQDALVDAAWPLGIAIEATSSLPKFDPFMYFI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03473 471 CDD NBD_sugar-kinase_HSP70_actin 63 222 - -
Vimu6g03473 471 Gene3D - 61 455 - -
Vimu6g03473 471 FunFam Apyrase 1 181 439 - -
Vimu6g03473 471 Pfam GDA1/CD39 (nucleoside phosphatase) family 56 461 IPR000407 GO:0016787
Vimu6g03473 471 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 61 190 - -
Vimu6g03473 471 Gene3D Exopolyphosphatase. Domain 2 181 439 - -
Vimu6g03473 471 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 22 461 IPR000407 GO:0016787
Vimu6g03473 471 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 180 195 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03473 Vimu-Chr6 31596213 31602996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03473 31 460 Calmodulin-binding Proteins AT3G04080 52.668 4.37e-152 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03473 K14641 - gmx:100781628 752.281