Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03423 ATGGTGAGCATTCAATCTCGATACACTGTCTTTCCCTCAGAAACCACCCCCAACGAAACACTCTTCTCCCTCTGCGAGCAAATCAAGCTTCGCACTCACGCACCACTCCTTTACGTCTTCAAGCCACACCCTCATCACGATGCATCAACTTTTCTCAACACTCTTAGGCACTCTCTAAGCCAGGCCTTGACAATCTATTACCCAGTTGCGGGTAGGTTGCGTTGGATCCAAGGGGGGCGATGGGAGCTTCACTGCAATGCCAAGGGTGCCCAACTCTTGGAAGCCATTTCCAAAGATCTCACTTTGGATGATTTGGATGATTTTGTGCCTACCCATTTGGTGTCACAGCTCATACCAAACATTGATTATGACGTTCCCATTGAGGACACGCCGTTGTTGGTTGCGCAGCTTACGAGGTTCCCCTGTGGTGGCGTTACCATTGGGGTGGCTTTGTGTCGAGGGGCCATCGACGGAATCGCAACCATGCGGTTCATGAACACGTGGGCCAAGTTGGCTCGGGGAGAGAACATTGAAAGGGCACCGTGCCATGATCGAAATGTTTTGAATTCGTACAAGGGTCATTCGGGGTTGCACGATCATTCGGAGTTTCACCCTCCTCCTCCTTGGTTAGGTCGATTGGAGAAAGACAGCAAGGTGGCGGTTGCGATGGTGAAGCTGACGGGTGAACAAGTGAAGAAACTCAAGCACAAGGGGAATTCTGGTTCTAGTTCACAACGTTATTCAACTTTTGAGGTTATTTCAGGGCACTTGTGGAGATGTGTGAGTAAAGCACGTTATGCAGGGAAAAGGGAGCAACCTACGAGGTTGACCACTTTGGTTAATTGTAGGCAACGAATGAAGCCACCTCTTGAAGAAGATTACGCAGGGAACACAGCATTTCCTACAGTGACAGCATGCTATTTTGGTGAGATGATGCAGAGGCCATTGAGTTATGCGGTTGGGAAGGTGAGGGCGGCGATTGAAAGAGTGACGGGGGAGTTTGTGGAGTCTGCACTTGATTACATAGATAAGGAGAAAGACATGAATTTGATTAGGTACAATTTTCACTACCCTGCCCCAAGTGTTCATAAGGGAGCATACAAGGGGAACCCGAATCTTTTTGTTGTGAGTTGGATGAATTTCTCTTTCAAGGATGCTGATTTTGGATGGGGAGAACCCGTGTATTTTGGCCCTGGATACATGGATTCTGAAGGAAAAGCATTTCTTCTCAATGACGCTAATGGGGATGGCATCATTGTCGCCATCTCCCTCCAAGCATCTCACATGGATGCTTTCAAGACAATTTTTTATCGTGATATCGACCAGGAATCTCTCATTTCCAAACTCTGA 1350 0.4793 MVSIQSRYTVFPSETTPNETLFSLCEQIKLRTHAPLLYVFKPHPHHDASTFLNTLRHSLSQALTIYYPVAGRLRWIQGGRWELHCNAKGAQLLEAISKDLTLDDLDDFVPTHLVSQLIPNIDYDVPIEDTPLLVAQLTRFPCGGVTIGVALCRGAIDGIATMRFMNTWAKLARGENIERAPCHDRNVLNSYKGHSGLHDHSEFHPPPPWLGRLEKDSKVAVAMVKLTGEQVKKLKHKGNSGSSSQRYSTFEVISGHLWRCVSKARYAGKREQPTRLTTLVNCRQRMKPPLEEDYAGNTAFPTVTACYFGEMMQRPLSYAVGKVRAAIERVTGEFVESALDYIDKEKDMNLIRYNFHYPAPSVHKGAYKGNPNLFVVSWMNFSFKDADFGWGEPVYFGPGYMDSEGKAFLLNDANGDGIIVAISLQASHMDAFKTIFYRDIDQESLISKL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03423 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 435 - -
Vimu6g03423 449 Gene3D - 207 438 IPR023213 -
Vimu6g03423 449 Gene3D - 1 205 IPR023213 -
Vimu6g03423 449 Pfam Transferase family 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03423 Vimu-Chr6 31010653 31012840 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03423 2 438 Monolignol Biosynthesis Gene Families AT5G48930 33.708 1.66e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03423 K13065 - gmx:100775549 682.945