Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03422 ATGGATAAAGAGACAGCGACAATGGACGGCATCCAAGAATCAGCCAAAAACATGGTTACCATACAAAGTTCCGATGTTGTGGTGCCCTCCGAGATTACGCCAACTTCAATCTCCTCACTCTCCCTATGCGACCAAATCAAGCTTCCCAACCACGGATCTCAGCTCTATATCTACGCCAACACACGCATCACCGATGATTCATCCTTCGCTTCTGCGGTTCACACTCTCTCAACCTCTCTCAGCAAAACCCTCACTGTTTTCCACCCTTTTGCCGGTCGCTTGCGCCGGATCCACGGTGGCCGCTTCCAGCTTCTCTGCAACGCCAAAGGGGTGCTTCTCGTGGCAGCCACGTGCAACACTGAACTCAGTTTTGAAGATCTGTGTGAGTTCGCTCCCACCTACGCTGTCCCCAAGATCAACTACGATGTCCCGATTGAGGATGTTCCCTTGCTGGTGGCGCAGGTCACCAGGTTCCCGTGTGGTTTCATCACACTTGGAATTGCCATGTGTCGCGCTTTCCTTGACGGAACTTCACTTTCGAACTTCATTAGCTCCTGGGCCAAACTCGCCAGAGGGGAGAGTTTAGATTCCGGTTTGACTCCTTTGTTTGATCGATCGAAACTTGATTCGTTCAAACTGAATAAACCGCCGCGGTTTGAACATATTGAGTTTCTGCCACCGCCCCTTTGGACAAAACGCGATGAGGTGATGCAACATGAACTGGGTACGGCCTTGATGGTACTCACAAAAGGGCAAGTTCAGAAACTGAAGAATAAAGCGAGTGACTTTGGAAGTGGGCATGGTAGAGGTTTTACTAGCTTTGAGGTCATAAGTGGTCACTTGTGGAGGTGCATGTGCAAGGTTCGTTATTTAGGTGATGCGTCTCAACCGACGAGGTTGAACACTTTGGTTAACTGTAGAAACCGTTTGAGGCCATCTCTTCCCACTGCATATTTTGGCAATGCAACATTTCCTACTGTGACAGAAACTTGTTCCTTTGATGACATTATGCAGAAACCTCTTGGCTATGCTGTGAGGAAAGTGAGTGAATCGATTGAGAGAATGCGTGATGAGTATGTCAGGTCTGCTCTTGATTATATAGAACGTGTGGAGGACATGGATTTGTTCAGGGACACGTTTTACAACTCTGCTGGGAAAGGTAGAGAAGACCCTAATGTGAATGTGGTTGGTTGGGCCAATTTTTTGTATTTTGAGACGGATTTTGGGTGGGGGAAACCTGTTATTTTGCTTCCCGGGAACATTAATTCTAATGGCAAGGCTTTCCTTTTGGACACTGCAAGTGGTGATGGCTTCGTTGTAGCTGTTTGTTTGCGGAAATCGTATGTAGATGCGTTGAAGAAGTTGTTCTATGAGGATATAGAGAAGCATGCTTCTAAATTGTGA 1404 0.4729 MDKETATMDGIQESAKNMVTIQSSDVVVPSEITPTSISSLSLCDQIKLPNHGSQLYIYANTRITDDSSFASAVHTLSTSLSKTLTVFHPFAGRLRRIHGGRFQLLCNAKGVLLVAATCNTELSFEDLCEFAPTYAVPKINYDVPIEDVPLLVAQVTRFPCGFITLGIAMCRAFLDGTSLSNFISSWAKLARGESLDSGLTPLFDRSKLDSFKLNKPPRFEHIEFLPPPLWTKRDEVMQHELGTALMVLTKGQVQKLKNKASDFGSGHGRGFTSFEVISGHLWRCMCKVRYLGDASQPTRLNTLVNCRNRLRPSLPTAYFGNATFPTVTETCSFDDIMQKPLGYAVRKVSESIERMRDEYVRSALDYIERVEDMDLFRDTFYNSAGKGREDPNVNVVGWANFLYFETDFGWGKPVILLPGNINSNGKAFLLDTASGDGFVVAVCLRKSYVDALKKLFYEDIEKHASKL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03422 467 Gene3D - 18 226 IPR023213 -
Vimu6g03422 467 Gene3D - 231 459 IPR023213 -
Vimu6g03422 467 Pfam Transferase family 18 457 - -
Vimu6g03422 467 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03422 Vimu-Chr6 30996365 30998680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03422 19 458 Monolignol Biosynthesis Gene Families AT5G48930 34.146 3.41e-74 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03422 K13065 - gmx:100819383 647.121