Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03362 ATGGCTTTTTGTTTAGTTTGTGATGGAATATCTCTAGAGTTGTTTCTTCTCTCTTCCACGTTCTCCAAACGCAGTACTGCAACATTTTTTCAGAGCCTTTGCCAGACTACTCTCTACATGGCATCCTTCATCATCTTCAAATCCAAGCTTCAATCTAGAGTACTTGTTCTTGTCCTCAACTTGGCTTTCATCTTCCTCTTCTGTCTACTTCTCAACCTTTATCTCCACCTTCCTAACGAAAATTCACAAGGCCACTCCAATGCCTCTTTCCTCTCAATCTTCAACCATGCAAGGCTCTTCAAAGATGTCAGTGTTCAAGGCTGCACTGATATACACAAGTACTCAGATTTTGACTCCAAGTGTTTGTATGTCAAAAGTAATCTCGAGTGCAGGTCAAAGGGATACATCAACTATCTTCAAATCTTCTACTGCAACTCTGGAAAATTCCCAATTTTTGGACAAGCCCTCCTTGCCTTGTGGCTTGTAGTGTTGTTTTATCTGTTGGGTGACACGGCTTCCAACTACTTTTGCAGTTCCTTGGAGGGTTTGTCCAACATCTTGAGGCTCTCCCCTACCATTGCAGGAGTGACCCTTCTTTCTCTGGGAAATGGAGCTCCTGATTTCTTTGCCAGCGTTGTGTCTTTCTCAGGATCATCCAGCAACGGTGCCGTAGGACTGAACAGCATCCTGGGAGGTTCTTTCTTTGTGTCGTGTGTTGTCTTGGGGGTCATAAGCATTCTGGTTAGCCCAAATCAGGTTGAGGTTGAAAAGGCCAGTTTCATTAGGGATGTCCTTTTCTTCCTTGTCTCTCTTTTCATCCTCCTTATCATAATTTACATTGGTAAAATCACTTTGTTTGCTTCAATCTGCTATGTTTCTATCTACTTCCTCTACGTCTGTGCTGTCTCAGCCACACATCTCATGTATGGAGGGGACAAAACAAATTCAAGGCAATATTCAATGTCTTCTGATGAGTCACCAGCGCCTAGCATACCTCTGTTGGGCTATGTTGATGAAGAGAAACAAAGTTTGGCAGAGATAGTGGTGGTTGAAGATAAGGACCAAAAGCCAGCCAGTAGTTTCGATGATAACTCATTCTTTGGTTGCCTCTACTTTGGAAAGTTGGTACAAGTGCTAGAACTACCTCTTTGCTTACCAAGAAGGCTTACAATTCCTGTGGTGAGTGAGGAGAAGTGGTCAAAGCCATTTGCCGTAATATCTGTCACATTAGCACCAGTTTTACTTGCAGTTCTTTTCAACACTCAAGGTGAAAACGTGGCTTCAAGGAGTAGCATAGTTACATACATAGTAGCTGCTTTGATTGGGATAGTTTTGGGCAACATGGCATGCGTGACAACTGATAGGTGCAGCCCACCAACCAAGTCCTTGTTTCCTTGGCTAGCTGGTGGTTTTGCCATGAGTGTAACATGGACTTACATAATTGCTGCGGAGCTAGTTTCTGTCTTGGTTTCAATTGGGAGCATAATTGGGGTTAGCCCTTCAGTGCTAGGACTAACAGTCCTAGCTTGGGGGAACTCACTTGGGGATTTCATAGCCAATGGTGCCATGGCCTTAAATGGTGGGGCAGATGGTGTTCAAATGGCCATATCTGGTTGCTATGCTGGTCCAATGTTCAATACCTTGATGGGTTTGGGGTTACCCCTTGTTCTCTCAGCTTTGTCTGATCATCCAGACCCTTATGTAATTCCCAAGGATCCTTCACTGTATGAGACAATTTTGTTCTTGATGGGAGGGCTTCTTTGGGCACTTGTGATCTTGCCAAAGAAGAGTATGAAGTTGGATAAATCCTTAGGGGTAGGGCTTCTCAGTGTTTACCTCTGCTTTTTGGTTATAAGGATTGCTCTGGCTTTTGGGGTTGTGAAATTCTAG 1890 0.4381 MAFCLVCDGISLELFLLSSTFSKRSTATFFQSLCQTTLYMASFIIFKSKLQSRVLVLVLNLAFIFLFCLLLNLYLHLPNENSQGHSNASFLSIFNHARLFKDVSVQGCTDIHKYSDFDSKCLYVKSNLECRSKGYINYLQIFYCNSGKFPIFGQALLALWLVVLFYLLGDTASNYFCSSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFSGSSSNGAVGLNSILGGSFFVSCVVLGVISILVSPNQVEVEKASFIRDVLFFLVSLFILLIIIYIGKITLFASICYVSIYFLYVCAVSATHLMYGGDKTNSRQYSMSSDESPAPSIPLLGYVDEEKQSLAEIVVVEDKDQKPASSFDDNSFFGCLYFGKLVQVLELPLCLPRRLTIPVVSEEKWSKPFAVISVTLAPVLLAVLFNTQGENVASRSSIVTYIVAALIGIVLGNMACVTTDRCSPPTKSLFPWLAGGFAMSVTWTYIIAAELVSVLVSIGSIIGVSPSVLGLTVLAWGNSLGDFIANGAMALNGGADGVQMAISGCYAGPMFNTLMGLGLPLVLSALSDHPDPYVIPKDPSLYETILFLMGGLLWALVILPKKSMKLDKSLGVGLLSVYLCFLVIRIALAFGVVKF 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03362 629 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 62 628 - -
Vimu6g03362 629 Pfam Sodium/calcium exchanger protein 158 301 IPR004837 GO:0016020|GO:0055085
Vimu6g03362 629 Pfam Sodium/calcium exchanger protein 467 620 IPR004837 GO:0016020|GO:0055085
Vimu6g03362 629 Gene3D - 402 621 IPR044880 -
Vimu6g03362 629 Gene3D - 189 316 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03362 Vimu-Chr6 30230939 30232946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03362 116 628 Antiporters AT5G17860 52.242 8.53e-173 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03362 K13754 - gmx:100811635 887.871