Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03361 ATGTTCTCCAACACCACAGTTTCTGTCCCCAAACGCATGGGGTTCAGAGTCAATTTCACTTGGTTCCTGAACATCTCCTTCCTCATGATCGTGTTATGTGTTTCTCTTATTTCCCACTTCCATTCTTCGGATCATGTTGTTCTGAGGAGAAACCGGGTAGGCTTCAGGGAGGGCGAAAAGGATTGCAAAAGTTTCCACAAATTGGAAGACTCAAAAGCCAAGTGCTTGTACTTGAAATCCAATGATCCTTGTGTTTCTCAGGGTTATGTCGACTACCTTTACATTTTCTATTGCAAAGTGGGGGATTTCCCTCTATTGGGTCATAGTCTTTTGTTTCTTTGGCTTTTGGTTCTGTTCTACCTGTTGGCCAACACTGCCTCCGACTACTTTTGTCCTTCTCTTGAGCACTTGTCCAAATTGCTGAGACTCTCTCCCACAATTGCTGGGGTGACTCTTCTCTCTCTTGGAAATGGTGCTAATGACGTTTTTGCCACCCTTGTCTCTTTCAAGGGTAGTGGGACCCAGGACATTGGTTTCAACACTGTGATTGGAGGTGCATCCTTTGTTTCCTGTGTTGTGGTTGGAATATTGAGCATTTCAATTAGGGAAAGGGGGATTCGTGTCAAGAAGTGGGCCTTGGTGAGAGATGTCTGTTTCCTTCTCCTTGTTCTTTTCTGTTTGTTGATCATTTTGATCACTGGTGAAATCAGTGTTCCTGGGGCAATTGGTTTTTGCTTGATGTATGTGGTGTATGTGGTGGTTGTTTATGTCTCATCTAAACGAGGGAATAAAGGTGTATGCGACGATGCTGATACTGAAAGTGATGGTGATTTGAGTCATGGTGGTGGCAATGATTTAGGTGTGCCTTTGCTTATTGGCATGGAGAAAGGACTTGCAGATACAGCTCAGGAATTTGACGTGAAAATAGGGAGGAAATGTTGCTGTTTGAAATCTTCAATTTGTAGAATGTTACTTTTTGTCATGGAGATGCCACTTTACCTGCCTAGGAGATTGACAATTCCCGTTGTTTGTGAAGAGAGATGGTCCAAAGGGTATGCAGTTTGTTCAGCTATGCTAGCACCACTTCTGCTGTCTTTCTTGTGGGTACCAAACCAGGAAAACAACTTCAACTCAAGCCTTATTGTTTGTGGAATTGGATTCTTGCTTGGGATTACACTAGGGGTAACAACATTTTTCACAACCAATGTGTCAAGCCCTCCAAGGAAGTACTTGTTTCCTTGGCTTGCAGGAGGATTTGTGATGAGTGTGACTTGGAGCTACATTTCAGCACAAGAATTGGTGGGGTTGCTGGTTTCACTTGGTTACATATGTGGTGTCAGTCCTTCAATCCTGGGGCTAACAGTTCTTGCCTGGGGAAATTCACTTGGGGATTTGGTTACAAATTTGACAATGACTTTGTATGGTGGATCAGAAGGTGCTCAAATTGCAATATCAGGATGTTATGCGGGTCCTATCTTCAATATAGTGGTTGGATTAGGCTTATCTCTTGTGAATACTACTTGGTCAGAGTACCCATTTTCTGTTGTGATTCCTAAAGATCCATATCTTTGGGAGACATTAGCACTTTTGGCAGTTGGATTGGTTTGGGCTCTTGTTGTGTTGATTAGAAGAGATATGAAACTTGATGCAGTATTGGGAGTAGGACTCTTGGTTATATACTTCATTTCTCTGTTTCTGAGGCTGATTCAAACACTTGGGTCACTCCAATTTCAGAATATGATAAACTCACTGTTCATAACATCATAA 1767 0.4244 MFSNTTVSVPKRMGFRVNFTWFLNISFLMIVLCVSLISHFHSSDHVVLRRNRVGFREGEKDCKSFHKLEDSKAKCLYLKSNDPCVSQGYVDYLYIFYCKVGDFPLLGHSLLFLWLLVLFYLLANTASDYFCPSLEHLSKLLRLSPTIAGVTLLSLGNGANDVFATLVSFKGSGTQDIGFNTVIGGASFVSCVVVGILSISIRERGIRVKKWALVRDVCFLLLVLFCLLIILITGEISVPGAIGFCLMYVVYVVVVYVSSKRGNKGVCDDADTESDGDLSHGGGNDLGVPLLIGMEKGLADTAQEFDVKIGRKCCCLKSSICRMLLFVMEMPLYLPRRLTIPVVCEERWSKGYAVCSAMLAPLLLSFLWVPNQENNFNSSLIVCGIGFLLGITLGVTTFFTTNVSSPPRKYLFPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSLGDLVTNLTMTLYGGSEGAQIAISGCYAGPIFNIVVGLGLSLVNTTWSEYPFSVVIPKDPYLWETLALLAVGLVWALVVLIRRDMKLDAVLGVGLLVIYFISLFLRLIQTLGSLQFQNMINSLFITS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03361 588 Pfam Sodium/calcium exchanger protein 112 256 IPR004837 GO:0016020|GO:0055085
Vimu6g03361 588 Pfam Sodium/calcium exchanger protein 415 567 IPR004837 GO:0016020|GO:0055085
Vimu6g03361 588 Gene3D - 143 268 IPR044880 -
Vimu6g03361 588 Gene3D - 354 568 IPR044880 -
Vimu6g03361 588 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 318 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03361 Vimu-Chr6 30216634 30219881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03361 15 576 Antiporters AT5G17850 51.489 2.50e-168 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03361 K13754 - gmx:100787016 911.753