Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03348 ATGATGAAGATCAATGTAATATGGCCCTTCTTTTGCATCATAGTTCCCTTAGCATTTGGGGAGTTGAAGGTTGGATTCTATGATTCTTCATGCCCAAAAGCAGAGTCCATTGTCAATAAACTTGTGCAGAATCGATTCAATCGTGACAAGACCATTACTGCAGCTTTGCTTCGCTTGCATTTCCATGACTGTGCTGTCAGAGGTTGTGATGCATCCATTCTTATAAATTCCACAAAGTCTAACAAGGCAGAGAAAGAAGCAGACGCAAACGACGCCGTTCGGGGATTTGACCTAATCGATGAAGTGAAGGAAAACCTCGAATCTGCATGCCCTTTAACAGTGTCATGTGCAGACATCATAACCCTAGCTACCCGAACTGCAGTGGCCTTATCTGGAGGACCCAAATACCAAGTTCCCACCGGAAGACGCGATGGACTGGTCTCCCACAGCGACGATGTCACCATTCCAGGACCCCGCGCCCCCGTTTCAATAATTTCTCGATTTTTCAATAGGAATTTGGGCCTCACAACGCAGGAAATGGTGACCCTTTTTGGTGCACACACTGTTGGTGTTGCTCACTGCAATTTCTTTGATGATAGACTCTCGAGTCCTGACCCTACAATGGACCCTGCTTTGGAAGCTAAGTTGGTGAAGTTGTGCAGGGATCGTGATGCTTTTACGCCCTTGGACCAGAACACTTCTTTGCTTGTTGATAACGACTTCTACCAGCAGATTCTTGCCAAGAAAGGGGTGCTGCAGATTGATCAGCAGCTTGCCTTGGATAAAAGTACGAAAGGGTTTGTGACAGATTTGGCTTCTGATGAGGCTAAGTTCCAAAAGAGCTTTGCAAATGCGATGGTGAAGATGGGGAGTGTTGATGTTCTGGTAGGGAGTCAAGGAGAAATTCGCAAGAAATGCTCGGTCTTCAATAAACGCAGCTAG 942 0.4618 MMKINVIWPFFCIIVPLAFGELKVGFYDSSCPKAESIVNKLVQNRFNRDKTITAALLRLHFHDCAVRGCDASILINSTKSNKAEKEADANDAVRGFDLIDEVKENLESACPLTVSCADIITLATRTAVALSGGPKYQVPTGRRDGLVSHSDDVTIPGPRAPVSIISRFFNRNLGLTTQEMVTLFGAHTVGVAHCNFFDDRLSSPDPTMDPALEAKLVKLCRDRDAFTPLDQNTSLLVDNDFYQQILAKKGVLQIDQQLALDKSTKGFVTDLASDEAKFQKSFANAMVKMGSVDVLVGSQGEIRKKCSVFNKRS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03348 313 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 Gene3D Peroxidase, domain 2 156 289 - -
Vimu6g03348 313 PANTHER PEROXIDASE 25-RELATED 15 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 Gene3D - 25 310 - -
Vimu6g03348 313 ProSiteProfiles Plant heme peroxidase family profile. 21 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 FunFam Peroxidase 25 157 - -
Vimu6g03348 313 CDD secretory_peroxidase 21 309 IPR033905 GO:0004601|GO:0042744
Vimu6g03348 313 FunFam Peroxidase 156 289 - -
Vimu6g03348 313 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Vimu6g03348 313 Pfam Peroxidase 39 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03348 313 SUPERFAMILY Heme-dependent peroxidases 21 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03348 Vimu-Chr6 30037606 30040067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03348 1 310 Peroxidase AT4G26010 53.205 5.46e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03348 K00430 - gmx:100777946 466.077