Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03347 ATGAAGTACCTCACAACCATTCTTACGTTGTTCTTTGTGTTTCCCTTTGCATTTGGTGATCTGAGAGTTGGGTTCTATGGCTCTAGCTGCCCCAGAGCAGAGGAAATCGTTCGACAAATTGTTCAAAGGAGATTCAACCGCGATCGATCCATTACTGCAGCCTTGCTTCGCATGCACTTCCATGATTGCTTTGTCAGAGGGTGTGACGCGTCCATATTAATAGACTCAACCAGGGGCAACCAATCTGAGAAAGCCGCAGGGGCAAACGGCACCGTTCGGGGGTTCGAGCTAATAGACGAAATAAAAAAAGGGTTGGAAACAGCCTGCCCTTCAACGGTTTCATGTGCGGATATAATAACCCTTGCCACACGTGATTCCGTGGCCATGGCAGGTGGGCCCCGATACGACGTCGCAACGGGAAGGCGTGACGGCCTCGTGTCCAGAATCTCTGACGTGTTGCTGCCTGGGCCACGTTCCACTGTGTCGGCAGCGCAGCAAGCGTTCGCCGAAAACGGCATGTCGTTGGATGAAATGGTGACGCTGTTGGGAGCGCACACTATTGGTTTGGCGCACTGTAGTTTCTTTCGCGACAGGCTCAACGACCCCAATATGGACCCTGGTTTGCGGGCCAAGTTGGGCCGGATTTGTAGGCCCAAAAAAGGCGACCCCACAACTTTTCTGGACCAAAACACGACGATGGTTTTTGACAATGAATTCTACAATCAAATTATTTTAAAAAGGGGTGTGCTTTTTATTGATCAGCAATTGGCTTTGGACCCTTTGTCGAGTAAGTTGGTGTCGGTTTTTGCTGGGAATAGTGCTGCTTTTGAAAGGAGTTTCATTAATGCTATTGTGAAGATGGGGAACATTAGAGTTTTGATGGGGACTGATGGAGATATTAGGAAAAATTGTAGGGTTTTTAACAAATGA 930 0.4839 MKYLTTILTLFFVFPFAFGDLRVGFYGSSCPRAEEIVRQIVQRRFNRDRSITAALLRMHFHDCFVRGCDASILIDSTRGNQSEKAAGANGTVRGFELIDEIKKGLETACPSTVSCADIITLATRDSVAMAGGPRYDVATGRRDGLVSRISDVLLPGPRSTVSAAQQAFAENGMSLDEMVTLLGAHTIGLAHCSFFRDRLNDPNMDPGLRAKLGRICRPKKGDPTTFLDQNTTMVFDNEFYNQIILKRGVLFIDQQLALDPLSSKLVSVFAGNSAAFERSFINAIVKMGNIRVLMGTDGDIRKNCRVFNK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03347 309 ProSiteProfiles Plant heme peroxidase family profile. 20 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 FunFam Peroxidase 155 287 - -
Vimu6g03347 309 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Vimu6g03347 309 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 Gene3D Peroxidase, domain 2 155 287 - -
Vimu6g03347 309 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 PANTHER PEROXIDASE 25-RELATED 11 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 FunFam Peroxidase 24 167 - -
Vimu6g03347 309 Pfam Peroxidase 37 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 Gene3D - 25 308 - -
Vimu6g03347 309 SUPERFAMILY Heme-dependent peroxidases 20 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu6g03347 309 CDD secretory_peroxidase 21 307 IPR033905 GO:0004601|GO:0042744
Vimu6g03347 309 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03347 Vimu-Chr6 30027946 30028986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03347 1 308 Peroxidase AT4G26010 57.419 2.31e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03347 K00430 - gmx:100820340 484.567