Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03334 ATGGGTGACCATGCTTTGTCTGATAGAGTTGGCAATGGTTGCTTGGACCCGGAGAACTTTAAACAGTTCAAACTTGTTAAGCGTTCACAGCTGAGCCATAATGTTGCAAAGTTCACATTTGCCCTCCCAACACCTACATCTGTTTTGGGTCTTCCAATTGGGCAACACATAAGTTGCAGGGGTAAAGATGCACAAGGTGAAGAGGTTATCAAACCGTATACCCCTACTACTCTGGATTCTGATGTTGGACATTTTGAACTAGTTATTAAGATGTACCCACAAGGTAGGATGTCTCACCATTTCCGTGAGTTGCGAGTTGGTGACTTCCTTGCTGTGAGAGGACCCAAGGGACGTTTTAAATACCAACCTGGTGAGGTTAGGGCATTTGGCATGCTTGCTGGAGGGTCTGGAATCACCCCAATGTTCCAAGTTGCTAGAGCTATATTAGAAAACCCTAAGGACAAGACCAAAGTACATCTTATCTACGCCAATGTCACATATGAGGATATTCTTTTGAAGGAAGAACTTGATGGTCTTACTTCTAACTATCCAGATCAATTCAAAGTATACTACGTCTTAAATCAGCCTCCGGAGGTTTGGGATGGTGGTGTTGGATTTGTGACTAAGGAGATGATTCAAGCACATTGCCCTGCTCCAGCCCCTGATGTTAAGATCCTGAGATGTGGGCCACCACCTATGAACAAAGCCATGGCTGCACACCTTGATGCTCTTGAATATGCTCCTGAGATGCAGTTCCAGTTCTGA 765 0.4471 MGDHALSDRVGNGCLDPENFKQFKLVKRSQLSHNVAKFTFALPTPTSVLGLPIGQHISCRGKDAQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFRELRVGDFLAVRGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPKDKTKVHLIYANVTYEDILLKEELDGLTSNYPDQFKVYYVLNQPPEVWDGGVGFVTKEMIQAHCPAPAPDVKILRCGPPPMNKAMAAHLDALEYAPEMQFQF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03334 254 PRINTS Cytochrome B5 reductase signature 49 60 - -
Vimu6g03334 254 PRINTS Cytochrome B5 reductase signature 107 121 - -
Vimu6g03334 254 PRINTS Cytochrome B5 reductase signature 224 232 - -
Vimu6g03334 254 PRINTS Cytochrome B5 reductase signature 168 179 - -
Vimu6g03334 254 PRINTS Cytochrome B5 reductase signature 130 149 - -
Vimu6g03334 254 PRINTS Cytochrome B5 reductase signature 71 78 - -
Vimu6g03334 254 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 130 149 IPR001709 GO:0016491
Vimu6g03334 254 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 168 179 IPR001709 GO:0016491
Vimu6g03334 254 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 224 232 IPR001709 GO:0016491
Vimu6g03334 254 Pfam Oxidoreductase NAD-binding domain 131 237 IPR001433 GO:0016491
Vimu6g03334 254 PANTHER NADH-CYTOCHROME B5 REDUCTASE 13 254 IPR001834 GO:0016491
Vimu6g03334 254 SUPERFAMILY Riboflavin synthase domain-like 15 123 IPR017938 -
Vimu6g03334 254 CDD cyt_b5_reduct_like 23 254 - -
Vimu6g03334 254 FunFam NADH-cytochrome b5 reductase 112 254 - -
Vimu6g03334 254 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 110 249 IPR039261 -
Vimu6g03334 254 Pfam Oxidoreductase FAD-binding domain 23 121 IPR008333 -
Vimu6g03334 254 FunFam NADH-cytochrome b5 reductase 13 112 - -
Vimu6g03334 254 Gene3D - 113 254 IPR039261 -
Vimu6g03334 254 Gene3D Translation factors 13 112 - -
Vimu6g03334 254 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 18 122 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03334 Vimu-Chr6 29863556 29867298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03334 14 254 NADPH P450 reductases AT5G17770 87.967 6.74e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03334 K00326 - gmx:100805390 473.396