Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03245 ATGGCAATGTTTACTTTTGCAGATCATGATATTGTTGCCAGCTTTATCGTCAATAAATCTGTTTCTTTGCTAGAAGATTACAAGTTCCAGCTTGCAGATGAAATTTTTGATGAGATTGATGCTCCCTCTAGCAAAGTAGCTGTCGTGTCTCTAGAATCCTTACCTGGGCCAAACAAGACAAGAGTTGTTTTTGCAGTTGATTCTGAAGATAAAGGCACAGAAATGTCCTCTGCTGTCATCAGTTTGATAAGAGCATCATTTACATCCCTGGTTATACGCCAATCAATTCTGCAGCTTACTTCTTCATCCTTGTTTGGAGATCCCTACTCTTTTGAAGTGCTGAAATTGAAGGGAGGAATTACTATAATTCCACAACAGAATGCATTTCCTCTGCAGAAAGGGCAAGCAAAGTTTAGCTTTAAATTGAATTTCCCCATTTATCAAATACAATCCAATTTTAAGGAACTCACTAGTCAGTTAAAGTCTGGATTATATCTGACATCCTTTGAGGTTGGTCAACTTTCAGTTATTATTATGTGTTATGTGTCAATGATCACCACACTGTTCTTATGTATTGATAAAATGAGGAAGCTTAAAACTGTCCTATATGGGGGAATCCCTATACATAAATACAATTTACTATCCTCAGTACCTAACTTGTACATCAGCTTATCAAATTCTGATGGTTCAACAGTCGATTCTCCTACTCTTGTCCAGTCAACAGTTCTACTTGCAGTTGGGATTACTATAAAAGAGAGGCTAAAGCAACTGGCACAAACCATCATGGGACCACATAATCTGGGCTTGAATCACACTGAATTTGGTAGGGTTAAGCAGGTCCAACTTTCATCCGTCTTGCAACACTCCCTTCATGGAAATGATGGTAGTGGCTCTGCATGGTCGCCTTCTCCTGCTCCTCTGGCACATCCTCCACACCATCACCACCATCGACACCGGCATCATCATCATCATCACCATGATGCCCATCTTTCTCCTGAAATTTCTCCTTTACCCTCATCTACACCAGTACCAGTACCAGCATCAGCACCAACACCTACACCAACACCTACAGCTAGACATGCACATACTCATGCACATACACCCACGCCTATGCCTGTATCTACACCCAGGAAGGGTGCGCCTCCACCCAAGGTTGGTTCTCCTACCGCAGCAAAAGTTGCACCTGCACCAAGGAAAAATTCTCAATCTCAGCCTCCTAATTGTCGATTTGGTTTTAGAAAAAGGTCTACCCATAATTCTGGGAAGCATGCACATCCTCCAACACCTGCAGTTGCCCCTATTATTAACACGCATCATCCTGTTCCTGTTGCATCACCAAAATCACATATTGATCCCCCTACGCATGTTTCTCATTCAGAACCTGCATTGAGTCCTTTGCCGAATGTAGCTTTTGCTCATGCTGAGCCCCCTCCTAAGAATGAACTTGCCCCAGAACATTATTACACGCATTTGCCTGGGCTTTCATCATGTAAGTATGCTCAGTAA 1506 0.423 MAMFTFADHDIVASFIVNKSVSLLEDYKFQLADEIFDEIDAPSSKVAVVSLESLPGPNKTRVVFAVDSEDKGTEMSSAVISLIRASFTSLVIRQSILQLTSSSLFGDPYSFEVLKLKGGITIIPQQNAFPLQKGQAKFSFKLNFPIYQIQSNFKELTSQLKSGLYLTSFEVGQLSVIIMCYVSMITTLFLCIDKMRKLKTVLYGGIPIHKYNLLSSVPNLYISLSNSDGSTVDSPTLVQSTVLLAVGITIKERLKQLAQTIMGPHNLGLNHTEFGRVKQVQLSSVLQHSLHGNDGSGSAWSPSPAPLAHPPHHHHHRHRHHHHHHHDAHLSPEISPLPSSTPVPVPASAPTPTPTPTARHAHTHAHTPTPMPVSTPRKGAPPPKVGSPTAAKVAPAPRKNSQSQPPNCRFGFRKRSTHNSGKHAHPPTPAVAPIINTHHPVPVASPKSHIDPPTHVSHSEPALSPLPNVAFAHAEPPPKNELAPEHYYTHLPGLSSCKYAQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03245 501 MobiDBLite consensus disorder prediction 396 414 - -
Vimu6g03245 501 PANTHER F20B24.21 6 170 - -
Vimu6g03245 501 MobiDBLite consensus disorder prediction 289 429 - -
Vimu6g03245 501 MobiDBLite consensus disorder prediction 309 327 - -
Vimu6g03245 501 MobiDBLite consensus disorder prediction 337 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03245 Vimu-Chr6 29056730 29058501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03245 6 286 C3H Transcription Factor Family AT3G10810 43.662 4.71e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03245 - - vum:124835776 716.457