Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03238 ATGGAAGGAGAGGGTTATTGTGGGAGTTTCTTTCAGAGGTGCAAGCCTTACATAGCTATGATTTCTCTGCAATTTGGGTTTGCGGGTATGACCATAATCACTAAGGTCTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGCTTATAGACACGCCTTTGCTACTGCGGTTATTGCTCCTTTTGCTCTTGTTCTTGAGAGGTACCTATGGCAGAACAAAATACAAAAGTATTCGCTTCGTTGTTTTGAATCGTTTTCTGATCAACCTTCTCATCTTCTTTTCTTTGTCATTGGCAGGAAAAACTTATACTATGCGGGGTTGAAATTCACTTCCCCTACCTACTCATGTGCAATAAGCAACATGCTCCCTGCAATGACATTTGTGATGGCTGCTATTTTCAGGATGGAAAAATTGGAAATCAGAAAACTTAGATGCCAAGCAAAAGTGATAGGAACTATAGTAACAGTTGCTGGAGCCATGTTGATGACATTGTACAAAGGTCAAGTCATCAGTTTCTTGGGTTCTCAGTACATGCATCACCCCAGAAATTATGTTCCGGAAAACACCACTGATTCTGGGGAAAAGGATTGGTTTAAGGGCTCTATTCTTCTCATAATTGCCACCCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAAGTAATCAAGTGTTTTTAACTCAAACTGCAGTGACACTAAGGAAATACCCAGCTCAGCTCTCTCTCACAGCACTTGTGTGTGCCTTAGGTACACTGCAGTCAATTGCAGTTACCTTTGTCATGGAACACAAGACATCTGTTTGGACCATTGGCTGGGATATGAACCTTCTTGCAGCAGCCTATGCTGGAATAATATCATCAGGAATCACCTACTATGTTCAAGGGATTGTCATGCAAAAGAAAGGGCCTGTTTTTGTAACTGCCTTCAGCCCTTTGATAATGATTATCGTAGCCATCATGGGTGCTTTCATCCTTGCAGAAAAAATATATCTTGGAGGTGGTGGAGTACATGTTTTCGGTGCTAATCCAATAACTGATGTGGAATCATCTACTTGTGATTTCAGGGTCACGGGAGCTATTCTCATAGTAATGGGACTTTACGCGGTTCTGTGGGGAAAATACAAGGAGAACAAGGAGAAAGAAGCGGAGATAACCATTGAGGTGATGAAGTGTTGTTCAGAAAATGGGAGGTTGGAGACTGTGGTGGAAGATGCCGAAGTAAACAACGATATTGAGATGCAAAAGGGTGAAGAAGCGTTGAGAGATTTAAGGGTAGCCATTGTTGTTCCAAAAGTTTAA 1299 0.4234 MEGEGYCGSFFQRCKPYIAMISLQFGFAGMTIITKVSLNRGMSHYVLVAYRHAFATAVIAPFALVLERYLWQNKIQKYSLRCFESFSDQPSHLLFFVIGRKNLYYAGLKFTSPTYSCAISNMLPAMTFVMAAIFRMEKLEIRKLRCQAKVIGTIVTVAGAMLMTLYKGQVISFLGSQYMHHPRNYVPENTTDSGEKDWFKGSILLIIATLAWASFFILQASNQVFLTQTAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKTSVWTIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPLIMIIVAIMGAFILAEKIYLGGGGVHVFGANPITDVESSTCDFRVTGAILIVMGLYAVLWGKYKENKEKEAEITIEVMKCCSENGRLETVVEDAEVNNDIEMQKGEEALRDLRVAIVVPKV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03238 432 Pfam EamA-like transporter family 16 164 IPR000620 GO:0016020
Vimu6g03238 432 PANTHER WAT1-RELATED PROTEIN 15 380 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03238 Vimu-Chr6 28992250 28994315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03238 1 430 Nodulin-like Gene Family AT5G07050 52.381 5.13e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03238 - - pvu:PHAVU_001G118300g 655.21