Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g03237 ATGGAGCTCTTCTCCTTCCTTTTCATTGCCCTTCTCTTCACTTTCTATCTCTATTTTGTTACAGGAAAACCCCGCAAAACTAACCACAAAGGCTTCAAAAGCTACCCTCTCATCGGAACCTTACCAGAATTCCTCAAAAACCGCCATCGCTTCCTCGAATGGAGCACCCAAGTCCTCCGCGACTGCCCCACCAACACCGCCGTCTTCTCCCGCCCCTACAGTTACCACGGCGTCATAACGGCCAACCCCGACAACGTGGAACACATGCTCAAAACCCGATTCCAGAACTACCCGAAGGGCGACCGCTTCATCCTCCACCTCCAAGACTTCCTCGGCAACGGAATCTTCAACTCCGACAGCGAACTCTGGAAGGTGCAGAGAAAAATCGCCAGCCACGAGTTTAGCACCAAATCACTCCGTAACTTCATTGTCAACTCCGTCACCACCGAACTCCAAACCAGGCTTCTTCCAATTCTCTCCTTAGCCTCGCAGACAAACAAGATCCTCGATTTGCAGGACCTCTTCGAGCGCTTCGCTTTCGACAACGTCTGCAAGCTAGCTTTCAACGTCGACCCCGCCTGTCTCGGCGGCGACGGTACTGCCGGTGCCGAGTTCATGAGCGCGTTCGAGGCCGCCGCCGGGCTGAGTTCAGGGAGATTCATGAGCGCGTTACCCTTAATGTGGAAAATGAAAAAGCTGTTGAACATCGGAACAGAAAGGAGACTGAAAGAATCAATCACTACCGTCCACGTGTTTGCTGACTCCATCATACGGTCCCGATTGGAGTCCAGGGATCCCGCCGGCGACGACGAAGATTTGCTTTCGCGTTTCATCAGAACAAAGGAGAGCTCGCCGGAGTTTCTCCGCGACGTTGTGATAAGTTTCATTCTCGCAGGGCGTGACACGACGTCGTCCGCGCTCACCTGGTTCTTCTGGATTCTTTCTTCCAGACCTGACGTTCGGAGAAAAATTCGCGACGAAATCGCAAGGGTTCGGTCCACCACACGTGGCGATGGCGAGTTCGGGTACGAGGAGCTGAGAGAGATGCATTACCTGCATGCGGCGCTTACGGAGGCGATGAGGTTGTACCCGCCAGTGCCTGTTGACTCGAAGAAGTGTCTGGACGACGACGTTTTACCGGATGGAACGAGGGTTGGGAAGGGTTGGTTCATATCGTATCACACGTACGCCATGGGGAGGATGGAGAGCGTGTGGGGAAAAGACTGTACCCTATACAATCCTGATAGGTGGTTGGAGAACGGCGTGTACCGAACAGAGAGTCCGTTTCGTTTTCCAGTTTTTCACGCAGGTCCACGAATGTGTCTGGGAAAAGAAATGGCTTATATTCAGATGAAGTCGATTGCAGCTTCCCTGATCGAGAACTTTGAGATTGAGGCAGTGGATAAGGACACGTGTCCAGAGCATGTGCTTTCTTTGACGTTGAGGATCAAAGGAGGCTTGGCCGTCAGGGTAAGGACAAGGGATACACGAGCCAGTCTCCACAGTAACACTGGTTTCTAG 1521 0.5279 MELFSFLFIALLFTFYLYFVTGKPRKTNHKGFKSYPLIGTLPEFLKNRHRFLEWSTQVLRDCPTNTAVFSRPYSYHGVITANPDNVEHMLKTRFQNYPKGDRFILHLQDFLGNGIFNSDSELWKVQRKIASHEFSTKSLRNFIVNSVTTELQTRLLPILSLASQTNKILDLQDLFERFAFDNVCKLAFNVDPACLGGDGTAGAEFMSAFEAAAGLSSGRFMSALPLMWKMKKLLNIGTERRLKESITTVHVFADSIIRSRLESRDPAGDDEDLLSRFIRTKESSPEFLRDVVISFILAGRDTTSSALTWFFWILSSRPDVRRKIRDEIARVRSTTRGDGEFGYEELREMHYLHAALTEAMRLYPPVPVDSKKCLDDDVLPDGTRVGKGWFISYHTYAMGRMESVWGKDCTLYNPDRWLENGVYRTESPFRFPVFHAGPRMCLGKEMAYIQMKSIAASLIENFEIEAVDKDTCPEHVLSLTLRIKGGLAVRVRTRDTRASLHSNTGF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g03237 506 PANTHER CYTOCHROME P450 18 488 - -
Vimu6g03237 506 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 CDD CYP86A 66 487 - -
Vimu6g03237 506 Pfam Cytochrome P450 31 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 Gene3D Cytochrome P450 16 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 SUPERFAMILY Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g03237 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vimu6g03237 506 FunFam Cytochrome P450 23 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g03237 Vimu-Chr6 28956607 28958127 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g03237 6 494 Cytochrome P450 AT3G56630 58.788 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g03237 - - pvu:PHAVU_001G118600g 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03237 6 28956607 28958127 Vimu6g03237 6 28956607 28958127 ECH