LGRPv2

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu6g03078	ATGAAAATAACAAATAATAATAATAAAGGGTTCATGTTGGAAGGAGGAAGAAAGTGTACTCCACCGCCGTTTTTGCTCAAGACCTACATGCTTGTCGAGGATCCGGCTACCGACAACATCGTCTCGTGGAATGTCGACGGGACGGCGTTCGTGGTGTGGCAGCCGGCCGAGTTTGCTCGTGATCTCCTCCCAACGTTCTTCAAGCACAGCAACTTCTCCAGCTTTGTGCGCCAACTAAATACTTATGGTTTTCGTAAAGTTGCAACAAGTAGATGGGAGTTTTTCAATGAGAGGTTCAAGAAAGGTGAAAGAGAACAGCTAAATGAGATTCAGAGAAGAAAAGCTTGGAGTAACAAGCAACAAACAGCTCAAGATTCTGATGAAGATCAAAGGTCATCATCAACTTCATCATCTTCTGGGTACAGTACTCTGGTGGATGAAAACAAGAGGCTTAAGAAAGAGAATGGAGTATTGAACTATGAGCTAACGAGCATGAAAAGAAAGTGCAAAGAGCTGGTTGATTTGGTGGCGAAATATTCATCACATGCAGATGCAGAAGAGAATAAGGAAGAAGATGAAAGGCCAATGCTTTTTGGAGTGAGATTAGATGTTGAAGGAGGGAGGGAGATTAAGAGGAATAGAAGCGCAAGCATTATGCTGTTTCAGTCATGCAAATAG	678	0.4277	MKITNNNNKGFMLEGGRKCTPPPFLLKTYMLVEDPATDNIVSWNVDGTAFVVWQPAEFARDLLPTFFKHSNFSSFVRQLNTYGFRKVATSRWEFFNERFKKGEREQLNEIQRRKAWSNKQQTAQDSDEDQRSSSTSSSSGYSTLVDENKRLKKENGVLNYELTSMKRKCKELVDLVAKYSSHADAEENKEEDERPMLFGVRLDVEGGREIKRNRSASIMLFQSCK	225

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vimu6g03078	225	Pfam	HSF-type DNA-binding	24	113	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
Vimu6g03078	225	PANTHER	HEAT SHOCK TRANSCRIPTION FACTOR	20	176	IPR027725	-
Vimu6g03078	225	SMART	hsfneu3	20	113	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
Vimu6g03078	225	SUPERFAMILY	"Winged helix" DNA-binding domain	20	113	IPR036390	-
Vimu6g03078	225	FunFam	Heat stress transcription factor B-4	16	114	-	-
Vimu6g03078	225	PRINTS	Heat shock factor (HSF) domain signature	75	87	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
Vimu6g03078	225	PRINTS	Heat shock factor (HSF) domain signature	62	74	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
Vimu6g03078	225	PRINTS	Heat shock factor (HSF) domain signature	24	47	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
Vimu6g03078	225	ProSitePatterns	HSF-type DNA-binding domain signature.	63	87	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
Vimu6g03078	225	Gene3D	-	16	114	IPR036388	-

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu6g03078	Vimu-Chr6	27121120	27122950	Wgd

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu6g03078	21	203	HSF	AT2G41690	53.623	3.08e-68	208

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HSF	Vimu6g03078		HSF_DNA-bind	4.3e-31	CL0123

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu6g03078	K09419		-	gmx:100802739	332.798

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu6g03078	6	27121120	27122950	Vimu6g03078	6	27121120	27122950	ECH
	Vimu6g03078	6	27121120	27122950	Vimu3g00426	3	4184773	4187865	PCT

Showing 1 to 2 of 2 entries