Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02979 ATGGCTGATTACCAACACTACATCCTTCTTTTCATCACATTTTTAGTCTCCACAATCGTGGTTCGAGCCATATTCAGCAGAAAACAAAACAAGACTAATAATAGACCACCAAGTCCGCAAGCCTTACCCATCATTGGACATCTCCACCTTCTGGCTCCAATACCTCACCAGGCTCTTCACAAGCTCTCTACTCGCTATGGTCCCATAATGCACCTTTTCCTTGGCTCCGTGCCTTGTGTAGTCGCTTCCACGCCAGAAGCTGCCAGAGAATTCCTAAAAACTCACGAAACCCGTTTCTCCAACCGCCCGCAAAGTTCTGCAGTTGATTTTCTGACATACGGCTCCCAGGACTTCTCTTTTGCGCCATTTGGACCTTATTGGAAGTTCATGAAGAAAATATGCATGTCTGAACTTCTGGGGGGTTCCACGTTAAGTCAGCTACTTCCTGTGAGGAGACATGAGACGATAAGGTTTCTGAGGCTTATGCTCAAGAAAGGGAAGGCGGGTGAGGCTGTTGATGTTGGGGGCGAACTTCTAAGACTCTCGAATAACGTTGTGTCGAGGATGATTATGAGCCAAACGTGTTCTGAAGATGACAGTGAAGCTGAAGAGGTGAGGAAGTTGGTGCAAGACACTGTTCTTCTCACGGGGAAGTTTAATGTGTCGGATTTCGTTTGGTTCTTTAAGAACTGGGACGTGCAGGGGTTCGGGAAGAGACTGAAGGAAATTCGGGACAGGTTTGACACCATGATGGAGAGGGTGATCAAGGAGCATCAAGAGGAAAGAAAGAAGAGAAAGGAAGTGGGAAGTGGAAGAGATGATGATCATATCAAGGATCTACTTGATGTGTTATTGGACATACATGAAGATGAGAACTCTGACATAAAATTGACAAAAGAGAACATAAAGGCCTTCATCTTGGACGTATTTATGGCAGGAACAGACACTGCGGCCTTGACAATCGTATGGGCTCTGGCTGAGTTGATCAACCACCCAGATGTGATGGAGAGAGCAAGGCAAGAGATTGATGGTGTGATTGGAAGTGGTAGATTAGTAGAAGAATCAGACCTTGTCAACCTTCCTTACCTACAAGCTATAGTCAAAGAAACGCTGAGGATTCACCCCACAGGTCCATTAATTGTTAGAGAATCGTCTGAAAACTGTAATATATGGGGCTATGAGATTCCACCAAAGACCCAGTTGTTTGTTAATGTGTGGGCTATTGGTAGGGATCCCAACCACTGGGAGAACCCACTTGAGTTTAGACCAGAGAGGTTTCTTAGCGAAGAGGGAAGTGGTAAGAGCCCGTTAGATGTGAGGGGACAGTATTTTCATCTGATTCCGTTTGGGAGTGGAAGACGAGGTTGTCCTGGAACCTCACTGGCTTTGCAGGTTGTACAGACTAACCTTGCTGCTATGATTCAGTGCTTTCAATGGAAGGTTAAAGGAGAAAATGAGAGTGTTGACATGGAAGAGAAACCTGGGTTAACTCTTTCAAGGGCTCATCCATTGCTTTGTGTTCCCGTGCCTAGGCTTAATCCTTTTCCTCCCCTGTGA 1557 0.4579 MADYQHYILLFITFLVSTIVVRAIFSRKQNKTNNRPPSPQALPIIGHLHLLAPIPHQALHKLSTRYGPIMHLFLGSVPCVVASTPEAAREFLKTHETRFSNRPQSSAVDFLTYGSQDFSFAPFGPYWKFMKKICMSELLGGSTLSQLLPVRRHETIRFLRLMLKKGKAGEAVDVGGELLRLSNNVVSRMIMSQTCSEDDSEAEEVRKLVQDTVLLTGKFNVSDFVWFFKNWDVQGFGKRLKEIRDRFDTMMERVIKEHQEERKKRKEVGSGRDDDHIKDLLDVLLDIHEDENSDIKLTKENIKAFILDVFMAGTDTAALTIVWALAELINHPDVMERARQEIDGVIGSGRLVEESDLVNLPYLQAIVKETLRIHPTGPLIVRESSENCNIWGYEIPPKTQLFVNVWAIGRDPNHWENPLEFRPERFLSEEGSGKSPLDVRGQYFHLIPFGSGRRGCPGTSLALQVVQTNLAAMIQCFQWKVKGENESVDMEEKPGLTLSRAHPLLCVPVPRLNPFPPL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02979 518 Pfam Cytochrome P450 36 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 SUPERFAMILY Cytochrome P450 36 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 FunFam Cytochrome P450 family protein 27 506 - -
Vimu6g02979 518 CDD CYP93 67 508 - -
Vimu6g02979 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vimu6g02979 518 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02979 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02979 Vimu-Chr6 26291613 26293286 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02979 1 511 Cytochrome P450 AT5G06900 50.292 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02979 K24188 - gmx:100779342 897.501