Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02960 ATGGAATTGGCTTCATATCCCAAGCTTAGTCTGAGAAATTCACTTCCAACTCCTAGATCATCCGAGCTAGCTCCTGGAAGTCAAACCTCCACACTTAGCTGGCACGGCAACTCAGAGACACCAGCTGACATTTTCTTGCACGGCAACTCAGGGACAAGCTTTGCCGGTCCCGGTCATCCTCCAGGGGAAAGTTACACAGGTGTCACTGACTCGAGCTGTGCTCTCTCTCTTCTGTCAAGTCAAACATGGGGTTCTAGAAACACAGCACCAAGTCTGGGGTTGAATAATATGATAAATTTCAACGGGACACCCATGACACAACTTACTGCTTCATCTCATGGTGCATCACTCCATGAACTTCCAAATACCTCGTGGTGTTTCAAGGGCATTGATTCTGGTAACTGTTCGCCTGAGGTTGTCCCTGATCTAGGTCTGGGTCATATTTCACAGCCTCTGAATGGCCAGCTCCATGGTGAATTAGATCTGTCTCAACAGGGCAGGAGGCATTACATGGATCTAGAACAGTCCAGGGAATATGAATCTGCTCATTGGTCACTTTAA 561 0.4759 MELASYPKLSLRNSLPTPRSSELAPGSQTSTLSWHGNSETPADIFLHGNSGTSFAGPGHPPGESYTGVTDSSCALSLLSSQTWGSRNTAPSLGLNNMINFNGTPMTQLTASSHGASLHELPNTSWCFKGIDSGNCSPEVVPDLGLGHISQPLNGQLHGELDLSQQGRRHYMDLEQSREYESAHWSL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02960 186 MobiDBLite consensus disorder prediction 10 47 - -
Vimu6g02960 186 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02960 Vimu-Chr6 26105861 26106421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02960 29 186 SBP-box Gene Family AT2G42200 35.165 9.43e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02960 - - gmx:100780949 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02960 6 26105861 26106421 Vimu6g02960 6 26105861 26106421 ECH
Vimu6g02960 6 26105861 26106421 Vimu3g00333 3 3188066 3188641 PCT