Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02954 ATGTATCAGTGTAGTTCCCAAATGTACGGAACTGATTGGGAATCCTACATGGGGATTACCAACCTAGCTAAGGTTGTTGGATCAGAACAAATGAGTGTTCTTGAGCCAAAAAACTCACCCTTCAACATTGTCACCGCTCCTCTTCAAATTCAAACCCCACAAGGCTTTTGTGCAACTGCAACAAAAGGGCTTGTGAGTTTTCAAGCTCAACAACATGTTCATCATCAGCATCAGATTGAAGTTCCTGCTTGGTGCTTTGACTCTAACATGTTGAATATTCGCCAAGCCTCTGGGGATAACTTCACCACCAAACAAGATCCACCCTCTTCTCAGTTCACAAGCTCTTTGTGCCCGGTTGCCGAATCTTTCTTGTCGTCCAGCACTGGTGCAGATTGTCCTTCTTCTTCTGAAAAATATTGTAAAATTACTTCCTATTCTGAAAAGCATAGCAGTATGCAGCCTGATGGTATGCCATATTACGATCGCTTTTCCCAAGAAGAAGATAAATTACTCAGAGATGATGCTGCCACGGATGAAAGGCCCCTTGAAATTTCCTTTCAGAGAAACCAGCCACAAAAGCAAGCTCCTCATAGACTTTGTGGGGTTGCCTGTGTAACTTCTAGCAACTCTGCTTCTAGAAGAGGGAAAAGAAGAATAAAATGGACCGACGATCTACACGAGCCATTTATGATGATTGTTAACAGTCTTGGTGGTCCAGAAAGTAAGTTAACTATTGTTTACACTAAAAGTGAAAAACAACAAAGAAACATCTTGTTACCAGAGGCAAAACCTAAGGCTATACTAGATATGATGAAATCAGATTTGCTGTCCATTTCTCATGTTAAAAGTCATTTACAGTTACCACTTTGCCTTTCAGAAAAATCCGAGGAAGGACAGAGAATGGATGGGGTGGCTGAGCTTCAAGTGAAAATCCACATGCAAATTGAGGAATCAAGGCAACTGCAACTAGAGGTTCGGAGGAATATCTGCCAACAACTAGAGATGCAACGAAATCTCCAAATGCTAATTCAACAGCAGAGCCAGCAACTCAAAGTAATGTTAGATTACCAAAAGAAAAAACACAAACTGGACACAGAACTGGAAGCAACTGTCTCCTAA 1119 0.4138 MYQCSSQMYGTDWESYMGITNLAKVVGSEQMSVLEPKNSPFNIVTAPLQIQTPQGFCATATKGLVSFQAQQHVHHQHQIEVPAWCFDSNMLNIRQASGDNFTTKQDPPSSQFTSSLCPVAESFLSSSTGADCPSSSEKYCKITSYSEKHSSMQPDGMPYYDRFSQEEDKLLRDDAATDERPLEISFQRNQPQKQAPHRLCGVACVTSSNSASRRGKRRIKWTDDLHEPFMMIVNSLGGPESKLTIVYTKSEKQQRNILLPEAKPKAILDMMKSDLLSISHVKSHLQLPLCLSEKSEEGQRMDGVAELQVKIHMQIEESRQLQLEVRRNICQQLEMQRNLQMLIQQQSQQLKVMLDYQKKKHKLDTELEATVS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02954 372 SUPERFAMILY Homeodomain-like 215 286 IPR009057 -
Vimu6g02954 372 Gene3D - 215 288 - -
Vimu6g02954 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 201 361 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02954 Vimu-Chr6 26059343 26061954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02954 204 357 G2-like Transcription Factor Family AT4G28610 37.423 6.05e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02954 - - gmx:102662952 498.434