Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02949 ATGATCAACGTGAAACGCGAACTGGACGGTGACGGTGATTGCAGTAGCATCGACAAGCGTGACTCTGAACTTCGTGCCGTAAGCAACGACGCTGATTACCAAACTCCGAAACGCCGTCGAGGTATCCGTTCTCGGTATCTGGCCTTCAAGAACATGATTCATGATGAAAGGGAAGAAATTGCTAGGCCTGACTCTAACAAGTTCGATTTGATCTTTAGTGAAATGGAGAGCTTACATCAGCAAGTTACAAAACCAAGAGAGCAAGTAGCTGACGCAAAGGCTCTTTTGGAAATCACCCAATCCCTGGTAATGTCTGTGAGAACTACAGCGAATGGTGGACTAACTCCTTCAGACTTTGTTACACACATTCTTAAAAAGTTCCGAGGACATGTGGGACCAAGTAATAGCGCAGAAGATTGCAGTAGAAATTCAGTAGCTTGGAATGATATTGGTGTTGCGGTGTCACATGTTTTTAGAGCAGGTTATGGCTGCTGTACAATGATGGCCCCAATGGATGCTAAAATAGAGCAGAGGAAGGTCATTAATCGTCGAAAGCGTGTGAGACCCACTGAATTGGAACGGCCTGAAGAGCTATGTGGAGGTTCAGGGGAAGGGATAGCGGAGACCGATAAGCATATGTTAACGATGTTTAACATCTTAAGGATGAATAAAGTTGTGAAGCTTGAAAATCTGGTTTTGAATCGGAACTCATTTGGACAAACCGTGGAGAATTTATTTGCTTTATCCTTTTTAGTCCGAGATGGTCGGGCTGAAATAAAAGTTAACGAGTCTGGATGGCAACTAGTTTCGCCTAGGAACGCTCCTGCTGCAAATTCAGTTGTTTCTGGGGATGTTGCTTTCAGCCATTTTGTTTTCCGATTTGACTTCAACGATTGGAAGTTGATGGTTCGCACTGTTAGGGTTGGAGAGGAGCTGATGCCTCACAGGAACAGTTTATGCGGAATCTCATGA 972 0.4444 MINVKRELDGDGDCSSIDKRDSELRAVSNDADYQTPKRRRGIRSRYLAFKNMIHDEREEIARPDSNKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRTTANGGLTPSDFVTHILKKFRGHVGPSNSAEDCSRNSVAWNDIGVAVSHVFRAGYGCCTMMAPMDAKIEQRKVINRRKRVRPTELERPEELCGGSGEGIAETDKHMLTMFNILRMNKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNESGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWKLMVRTVRVGEELMPHRNSLCGIS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02949 323 Pfam Nse4 C-terminal 226 313 IPR014854 -
Vimu6g02949 323 PANTHER UNCHARACTERIZED 29 317 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02949 Vimu-Chr6 26018936 26022134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02949 4 318 Non-SMC Element family AT1G51130 45.373 9.83e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02949 K22825 - gmx:100781485 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02949 6 26018936 26022134 Vimu6g02949 6 26018936 26022134 ECH