Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02887 CAGAGTGTTGTTCCGCTGAATACGTGGGTGTTAATCTCGAATTTCAAGCTGTCTTATAAGCTTCTCAGACGTGACGACGGAACTTTCAATCGTGAGTTGGCGGAGTTTCTTGATAGGAAGGTCCCTGCCAATGCAATTCCTGTTCATGGGGTGTTTTCAATCGATCATGTTGATAGAAACGTTGGCTCGTTTTACCGGGTGTATTTGCCGGCCTCTGGGGACGAGGCTCAATGGGGTATCAGAGACCTTGAGAGGCCGTTGAGCACCACGGAAATTGTTCCTGTAATCATATTCTTTCATGGGGGAAGCTTCTCTCATTCCTCGGCAAACAGTGCTATCTACGATACCTTCTGCAGGTACCTTGTGAGCATTTGCAAGGCTGCTGTGGTGTCCGTGAACTACCGGAGATCGCCGGAGCATCGGTATCCGTGTGCCTACGATGATGGATGGACAGCATTGGAGTGGGTGAAGTCCAGAACGTGGCTGCAAAGTGGGAGGGAGTCCAAGGTTCATGTCTACTTGGCAGGGGACAGTTCTGGTGGGAACATTGTTCATCATGTGGCAGTAAAGGCTGCAGAGGAAGAAATTGAGGTCCTGGGGAATATTCTTCTTCACCCTTTGTTCGGAGGAGAGAAGAGGACGGAATCAGAGTTGAGGTTGGATGGGAAATACTTTGTGAGGTTGAAGGATCGTGATTGGTATTGGAGGGCTTTTCTGCCTGAAGGAGAGAATAGAGACCATCCTGCTTGCAACCCCTTTGGACCAAGGGGGAAAAGCCTTGCGGGACTCAGGTTCCCCAAAAGTCTTGTTTGCGTGGCTGGTTTGGATCTTCTGCAGGATTGGCAACTGGCATATACAAAAGGTCTCGAGGATTCTGGACAAGAGGTCAAACTTCTCTATCTCAAGGATGCCACTATTGGCTTCTACTTCTTGCCAAACAATGAACATTTCTACTGCCTCATGAGGGAAATCAACAACTTCGTGAATTCTGACTGTTAA 999 0.4855 QSVVPLNTWVLISNFKLSYKLLRRDDGTFNRELAEFLDRKVPANAIPVHGVFSIDHVDRNVGSFYRVYLPASGDEAQWGIRDLERPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRYLVSICKAAVVSVNYRRSPEHRYPCAYDDGWTALEWVKSRTWLQSGRESKVHVYLAGDSSGGNIVHHVAVKAAEEEIEVLGNILLHPLFGGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGENRDHPACNPFGPRGKSLAGLRFPKSLVCVAGLDLLQDWQLAYTKGLEDSGQEVKLLYLKDATIGFYFLPNNEHFYCLMREINNFVNSDC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02887 332 Pfam alpha/beta hydrolase fold 96 309 IPR013094 GO:0016787
Vimu6g02887 332 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 172 184 IPR033140 -
Vimu6g02887 332 Gene3D alpha/beta hydrolase 1 330 IPR029058 -
Vimu6g02887 332 FunFam Gibberellin receptor GID1 1 330 - -
Vimu6g02887 332 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 96 112 IPR002168 GO:0016787
Vimu6g02887 332 SUPERFAMILY alpha/beta-Hydrolases 63 329 IPR029058 -
Vimu6g02887 332 PANTHER ARYLACETAMIDE DEACETYLASE 31 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02887 Vimu-Chr6 25465074 25466072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02887 1 330 Carbohydrate Esterase AT3G63010 73.414 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02887 K14493 - gmx:100788435 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02887 6 25465074 25466072 Vimu6g02887 6 25465074 25466072 ECH
Vimu6g02887 6 25465074 25466072 Vimu3g01702 3 31165278 31167797 ECH
Vimu6g02887 6 25465074 25466072 Vimu3g01702 3 31165278 31167797 PCT