Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02809 ATGACGACGATACGCAGATTCTGCTGCAACGATCTTCTTCGCTTTGCCTCCGTCAATCTTGACCATCTCACGGAAACCTTCAACATGTCTTTCTACATGACCTATCTTGCAAGATGGCCAGACTATTTTCATGTTGCTGAAGGTCCTGGAAATCAAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAGTCTTGGCATGGTCATGTAACTGCAGTAACAGTTGCTCCAGAGTATCGCAGGCAGCAGTTAGCCAAAAAACTTATGAATCTGCTGGAAGACATTAGTGACAATATTGACAAGGCTTACTTTGTCGATCTCTTTGTGAGAGCATCAAATGCGCCAGCCATCAAGATGTATGATAAGCTTGGCTATGTGATTTATCGACGGGTGCTACGGTACTATTCTGGGGAAGAAGATGGTTTAGATATGAGGAAGGCTTTGTCTCGTGATGTTGAAAAGAAGTCCATTATCCCTCTTAAACGGCCAGTGACTCCTGATGAATTGGAGTATGACTAA 525 0.4362 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNQIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYDKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELEYD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02809 174 Gene3D - 2 162 - -
Vimu6g02809 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Vimu6g02809 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Vimu6g02809 174 FunFam N-alpha-acetyltransferase 20 2 161 - -
Vimu6g02809 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Vimu6g02809 174 CDD NAT_SF 45 97 - -
Vimu6g02809 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu6g02809 Acetyltransf_1 8.7e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02809 K17972 - gmx:100306394 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02809 6 24706358 24714150 Vimu6g02809 6 24706358 24714150 ECH