Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02775 ATGATTTTGGCGCTTATTGCATTGCTCGCTTCCTTTTATTTCGTCAATTGGTTCATGCTTCTTCGCTTACAATTTCAAGTTGCTGGTGAACTCTCTCTGGCGGTGCTTAATTTCGTGAAAACCAAAAGAAAGGTGGAAGATGTCAGCGAGACACAACCATCGCCTCCATTCATTCATGCCTTCAAGGTGAGTTCATTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCGTCTCTTTTGTGTCCGCCATCTTCTGAGCCAGGTGATGGGTCTGGAAAAGAATATTTGTGTATTTCTTGATGTCTCAATTGATGCGGACCCCGTGGAAAGAATTGTTATTCAGCTTTTTGATAGTATTGTCCCAAAGACAGCCGAGAATTTTCGGGCGCTTTGTACAGGTGAGAAGGGCATTGGAGAATCAACTGGAAAACCTTTGCATTATAAGGGAACAAGCTTTCATCGTATAATTAGAGTTCATTTGTTTGAAAACGTGATAATTCACCAATTTCATTTATTGTGTCTCAACAGGGTGGTGATTTTTCAAGGGGTAATGGCACTGGCGGGGAAAGTATATATGGTGGAAAATTTGCGGGTAAGTTTACCTTTTTATGAAAATTTCAAACTAAGACATGATGGATCCGGCTTCCTTTCTATGGCTAATAGTGGCCCTAATACAAATGGATCTCAGTTTTTTATTACATTCAAGCGCCAACCACATCTAGATGGGAAACATGTTGTTTTTGGAAAAGTTGTCAATGGAATGGATGTTCTGAAGAAAATTGAGCTGGCAGGAACATCTGATGGGAAACCTACCCAGATAGTTAAAATTGTTGATTGCGGTGAAGTTTCTGAAACAAAAACTCAGCATACTGCTGAGAAGGAAAAAGGGAAAATGAGAAAAACAGGAAAACCCCTTCCTTCTGATGATAGTTCCGACTCTACTGACAAAAAGTCAAGGGGAAAAAGAAAAAAATCTTCCAAAGACACAAGGAAAAAAAGGAGAAGATACTCAACATCTGATAGTGATAGTTATTCCTCAGATTCTGAGTCAGATTCAGCTTCTGATTCTGAATCGGATTCAGCTGATTCTGATTCTAGTTCCTCTAGTTATGGGAAACACCAGAAGAGGAGAAATAAGCGCAGGCATGGGAAGAAGAGGAAATTTGGACGAAAGCAGAGCAAGAAAAGCAGGCACAGTCGAAGTAGAAGATCAAAGCACAAGTCTAGGCGTTATGATGATTCAAGTGATAGCTCTAGTGGTAGCAGCAGCAGCAGTAGTTCTGGCAATGAGAAAACTGATCGTGGCACCTCAATTCGTAAAAGACATGTTGACAATAAAGCACAAAGAAATCAAGCTGCCCTTGCTGCAGACACAGAAAAACAACCTTCTAGTCCTCCTCGGCAAGATCAAATTATTCCAGAGCAAACAACGGATACCAAGGTTAGAAGAACTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGGGCATTTGTGAATAACGGGCATGATACTAAAGCTGAATTTAGTGAACCTGCTAAGCAACATGCTAATTCAGATGATTCAAAGGAGAATAGAAGTGCAAGAACTGGGCGAAGTCCTACCAGGGATTCTGGTGAGCTAAACCAGGGACGTGCTTCGATGCTGGCTAGTTCTGGTCAAAAAGCATCTGAACCTGGAGCCCCTAAACATGGTCAGAGGTTTTCAAAAAGCCCTTCACCAAATGGCACACCTAAGCGTATTAAAAAAGGACGAGGCTTTACTGAGCGTTATGCCTTTGCCCGCAGATATCGTACTCCATCTCCTGAGCGGTCACCTCATGCATTTAGGTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAACACAAGCTACAGAAGTTATTCTGAGCGCTCTCCACCACGACGTTATCGGAGCCCACCTGGGGGCAGAAATCGTCCAAGATACCAAAGCAGGAGAAGTCTCAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGGCGTTTTAGAGACCGTGATCGGAGTCGGAGCCCAAGACGTAGTGTTAGCCCTGAAGACAGGCGGCCTCCAATAAGTGACAGATTAAAATCCCGACTTGGTCCAAGAAGTGATGAACGATTGGCAGACAGAAGGGGGAGGTCAAAGTCCAAATCTAGGAGCAGTGGCTCATCTCGGTCCAGATCCCCTGATGCTACACCACCAAAACGATATGATAAAAGGACTTCCGTATCTCGTAGCAGGTCTAGGTCCAGCTCTTCTGGTCAGAAGGGTTTAGTTTCTTATGGAGATGGTAGTCCTGATTCTGGAGTAAGGTGA 2394 0.4353 MILALIALLASFYFVNWFMLLRLQFQVAGELSLAVLNFVKTKRKVEDVSETQPSPPFIHAFKVSSFFSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLFRLFCVRHLLSQVMGLEKNICVFLDVSIDADPVERIVIQLFDSIVPKTAENFRALCTGEKGIGESTGKPLHYKGTSFHRIIRVHLFENVIIHQFHLLCLNRVVIFQGVMALAGKVYMVENLRVSLPFYENFKLRHDGSGFLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGMDVLKKIELAGTSDGKPTQIVKIVDCGEVSETKTQHTAEKEKGKMRKTGKPLPSDDSSDSTDKKSRGKRKKSSKDTRKKRRRYSTSDSDSYSSDSESDSASDSESDSADSDSSSSSYGKHQKRRNKRRHGKKRKFGRKQSKKSRHSRSRRSKHKSRRYDDSSDSSSGSSSSSSSGNEKTDRGTSIRKRHVDNKAQRNQAALAADTEKQPSSPPRQDQIIPEQTTDTKVRRTVDKQSHEEGELSPENGAFVNNGHDTKAEFSEPAKQHANSDDSKENRSARTGRSPTRDSGELNQGRASMLASSGQKASEPGAPKHGQRFSKSPSPNGTPKRIKKGRGFTERYAFARRYRTPSPERSPHAFRYGDRNIRRNFDRNTSYRSYSERSPPRRYRSPPGGRNRPRYQSRRSLSRSISRSPVRGRFRDRDRSRSPRRSVSPEDRRPPISDRLKSRLGPRSDERLADRRGRSKSKSRSSGSSRSRSPDATPPKRYDKRTSVSRSRSRSSSSGQKGLVSYGDGSPDSGVR 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02775 797 MobiDBLite consensus disorder prediction 306 797 - -
Vimu6g02775 797 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 130 302 IPR002130 GO:0000413|GO:0003755
Vimu6g02775 797 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 251 263 IPR002130 GO:0000413|GO:0003755
Vimu6g02775 797 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 IPR002130 GO:0000413|GO:0003755
Vimu6g02775 797 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 186 IPR002130 GO:0000413|GO:0003755
Vimu6g02775 797 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 236 251 IPR002130 GO:0000413|GO:0003755
Vimu6g02775 797 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 264 279 IPR002130 GO:0000413|GO:0003755
Vimu6g02775 797 MobiDBLite consensus disorder prediction 757 771 - -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 455 469 - -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 501 516 - -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 437 454 - -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 394 429 - -
Vimu6g02775 797 Gene3D - 106 312 IPR029000 -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 473 500 - -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 560 580 - -
Vimu6g02775 797 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 119 304 - -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 690 742 - -
Vimu6g02775 797 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 120 303 IPR002130 GO:0000413|GO:0003755
Vimu6g02775 797 SUPERFAMILY Cyclophilin-like 116 305 IPR029000 -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 608 651 - -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 307 341 - -
Vimu6g02775 797 MobiDBLite consensus disorder prediction 533 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02775 Vimu-Chr6 24328362 24336113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02775 135 300 U-box Gene Family AT5G67530 35.503 6.47e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02775 K09566 - gmx:100791082 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02775 6 24328362 24336113 Vimu6g02775 6 24328362 24336113 ECH