Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02758 ATGGCTCTTTCTGCCTCTATGCTCCAACTTCAACCCTCTTCACAAAAGAAGAAAACTGCTGTTTCCAGAAGTTGGGTTCTGCTCGACCACCATGGCAAACCCACTGTGCTCGATGCAGACAAGCATGCTATCATGCGCCTCGTTAAAATTCACGCCAGGGATCTTCGGATTCTCGATCCTCTCTTATCCTATCCCTCCACCATTTTAGGCAGAGACAAACACATTAAAGCTATCATCACTGCAGATGAGGTGTTGCTGAGAGACCCAACGGATGATGACGTTGTGCCAATTGTTGAAGAGCTTCGACGACGGTTATCCAAAGTAAGTGCTTCTGGGGAAGGCCGGGGAGAAGAAGAGACGTGTGCTCAAGATGGTGAAGGTGGAGACGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGTTTTATTTGAGGCAATTTGTAGTTTCCTTGACGCACGAACGAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTTACCTCTAAGATTAGCAGTCGCAATTTGGATAGAGTGAGAAAATTGAAATGTGCAATGACGAGGCTGACAAGTCGTGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTCGACGGTTTCATCATCTCCAACAAGTAGCTCTGATGCTCCCAAGTGGCTTTATGGTTCTCCAAATACAGGTTCAAGAATACACAAATCAAGCAGAGCAAGTGGAACAACAGTTCAAAGGGAGGATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCCAATTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACATTGCGAGAATACATCGATGACACAGAAGATTACATCAACATACAGCTTGATAATCACCGAAACCAGCTGATTCAGCTGGAGCTCTTCATCAGTGCCGGGACTGTGTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGCATGAACATTCCATACACATGGAAATCACCAGGCCACGAACATGTGTTTAAATGGGTGGTGATCTTTGCTGGAATGGTTTGTGCATCCTTGTTTTTATCCATAGTATCTTATGCCCGACGCAAAGGCCTTGTTGGGTCTTGA 1146 0.4407 MALSASMLQLQPSSQKKKTAVSRSWVLLDHHGKPTVLDADKHAIMRLVKIHARDLRILDPLLSYPSTILGRDKHIKAIITADEVLLRDPTDDDVVPIVEELRRRLSKVSASGEGRGEEETCAQDGEGGDENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMADLYLSRKSTVSSSPTSSSDAPKWLYGSPNTGSRIHKSSRASGTTVQREDDVEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKSPGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02758 381 Coils Coil 181 208 - -
Vimu6g02758 381 Pfam CorA-like Mg2+ transporter protein 269 367 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu6g02758 381 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 379 IPR039204 -
Vimu6g02758 381 MobiDBLite consensus disorder prediction 109 129 - -
Vimu6g02758 381 CDD Mrs2_Mfm1p-like 25 378 IPR039204 -
Vimu6g02758 381 Gene3D - 6 89 - -
Vimu6g02758 381 Gene3D Magnesium transport protein CorA, transmembrane region 95 310 - -
Vimu6g02758 381 MobiDBLite consensus disorder prediction 220 256 - -
Vimu6g02758 381 MobiDBLite consensus disorder prediction 220 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02758 Vimu-Chr6 24154666 24158217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02758 1 354 MRS2 Gene Family AT5G64560 68.293 2.97e-149 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02758 K16075 - gmx:100799368 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02758 6 24154666 24158217 Vimu6g02758 6 24154666 24158217 ECH