Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g02757 | ATGGCGAATCAGGTGGTGAAGGTGCGGAGGAACACGATTGTAACATGCATGACTTGCCCACTCTGCAACAAGTTGTTCAGGGAAGCCACAACCATATCCGAATGTCTTCACACGTGTGAGCCTTCTTCTCTTCCAATCTGTGTCAATTTTTTCTTCGATTTCTCTGCATTCGCTTCCTCCTTCACTCTTTGCCCCGATGCGGGAGCATCTGGACTTTGCGTAACCGGAGGGAGATATGGGAAGTGCATTTATGATAAAATTACGGATGAAGAATTGGAAAGTTGTCCAATATGTGGCATTGATTTGGGTTGTGTTCCACTCGAGAAACTGAGGCCAGACCACAGTTTGCAAGATGTGAGGGCCAAAGTTTTCCCCTTGAAGGGAAGAAAGGTGAAGGCACCTGAAATTGTGACCTCAATACCATTACCAGCTAGGAGAAAGGAGAGATCTCTTTCGTCTTTGGTGGTGAACACTCCAAGGGTATCTACACAGGCAACAATGACAGGAAGAAGAACAAAACCTTCAAGAAAGGCTAGTGGTCTGCGGTCCACTAGTTTTTCCTTTGAAAAGTCCATTAAAAAAGAGGAAGAATTACTGGAAGATCATCTTGAGAGTTCAAGCTCACCAGAAAATTCAAATAAGTTTGGTCAGAATTCCGGACAGAGTATGTCCCCTTGTGAGGGTAGTCAATCTGCACCCAATAAAGGATCAGAGAATGGTGGCGAACCATGGGATGCAAAATTGGATCTTTGGAAGCCTTTGAATTGTTTAGTAGAGGTGGCAAGTAGGAGTAAATCTTTCAAGTCTCATGTGCAAGGGTCTGATGCTAAATTAGAAACCACTCAAGTAAGTGAGAGTGACTCTCAGATGCAGAAAACTAAAAATAAGGAAAATAAACGCAAGGCAAAAGTTGAGGATGAAAAGATTAGCCCTTATCCTGCCTCTTCAGATACAGCAAAACCCAATAAATTGCGCAGAATGCGCAAGAAGAAGGAGCCTGCTTCTGGAGAATCAAGCATATCACCCCAAGCTGTGCTTGATTCTGCCAGCAGTAATAGACTCTCTAGGACTGGTCCAATCTGGTTCTCCTTGGTAGCTTCAGAAAACCAGGGAGGAGATGCACCGTTGCCACAAATTCCTGCAAGTTATGTGAGAATCAAGGATGGTAGCGTACCAGTCTCATTCATCCAAAAATACCTAATGAAGAAACTGGACTTGACTAGTGAAACAGAGGTTGAGATTAAATGTATGGGACAATCAGTGCTCCCTACATTGCGTCTATATAATTTGGTTGAGTTGTGGTTGGATACAGCATCGACGTCACAGAGAATTCCAGCAACTATTGGTTCATCAGCAAAGGATTTTGTCATGGTATTGGCTTATGCTCGGAAGGTTCCACACCCATGA | 1407 | 0.4378 | MANQVVKVRRNTIVTCMTCPLCNKLFREATTISECLHTCEPSSLPICVNFFFDFSAFASSFTLCPDAGASGLCVTGGRYGKCIYDKITDEELESCPICGIDLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVKAPEIVTSIPLPARRKERSLSSLVVNTPRVSTQATMTGRRTKPSRKASGLRSTSFSFEKSIKKEEELLEDHLESSSSPENSNKFGQNSGQSMSPCEGSQSAPNKGSENGGEPWDAKLDLWKPLNCLVEVASRSKSFKSHVQGSDAKLETTQVSESDSQMQKTKNKENKRKAKVEDEKISPYPASSDTAKPNKLRRMRKKKEPASGESSISPQAVLDSASSNRLSRTGPIWFSLVASENQGGDAPLPQIPASYVRIKDGSVPVSFIQKYLMKKLDLTSETEVEIKCMGQSVLPTLRLYNLVELWLDTASTSQRIPATIGSSAKDFVMVLAYARKVPHP | 468 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g02757 | 468 | MobiDBLite | consensus disorder prediction | 265 | 289 | - | - | |
Vimu6g02757 | 468 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 1 | 464 | IPR044807 | GO:0004842 | |
Vimu6g02757 | 468 | MobiDBLite | consensus disorder prediction | 198 | 246 | - | - | |
Vimu6g02757 | 468 | MobiDBLite | consensus disorder prediction | 290 | 310 | - | - | |
Vimu6g02757 | 468 | MobiDBLite | consensus disorder prediction | 336 | 350 | - | - | |
Vimu6g02757 | 468 | MobiDBLite | consensus disorder prediction | 151 | 186 | - | - | |
Vimu6g02757 | 468 | MobiDBLite | consensus disorder prediction | 205 | 237 | - | - | |
Vimu6g02757 | 468 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 6 | 136 | IPR013083 | - | |
Vimu6g02757 | 468 | MobiDBLite | consensus disorder prediction | 264 | 350 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g02757 | Vimu-Chr6 | 24145071 | 24152297 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g02757 | 2 | 387 | C3H Transcription Factor Family | AT2G30580 | 49.227 | 8.71e-106 | 316 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g02757 | K16277 | - | gmx:100793731 | 705.671 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu6g02757 | 6 | 24145071 | 24152297 | Vimu6g02757 | 6 | 24145071 | 24152297 | ECH |