Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02756 ATGGTGAATAATTTTGTGGTTGTTGGAACCGTTGAAGAGATTGGTGATTATTGCATCATAGATCATGAGAGAAGGGATTGCTTTCGAAGTACAAAAGATGTTGACTTTGGTAGGAGTGACAGTGCTAAATTACTTGTTGATTCTGGAAAATGTACTGGGACTTCAGAGGATATACCTAAATCTTGTTTTGGAACTCACATCAAACAGCCTGAGGGCAATTTGATAGATGCGGAAGGGAAGAGGTGGGACGGCGTCAGTGGTCACGGGACGGCTGCGGCGGCCAACGGATCCCTTTTAAAGGAGCCTCAGTATCGGGGTGTGAGAAAGAGACCATGGGGAAAGTTCACGGCGGAGATTAGAGACCCGTTGAAGAAAGCTAGGTGCCCCACGGGATTTCATGGACTCGCTGGCATCGCTGATCATGAAGTAAACGACAGCCAAACACTGCCTTTCCTTTTTATTATTATAGCGCTAACACAACACCTAAACGACACCGTTCATGCCCAACTCAACACAGGCACATATGCGATGTCATCTACGTCTTCCTCTACGCCACATTACAGTTCTTTCCCCTCGCCCTCATCATCATCCACCGCCACTCGTCCTTACTTTATCACAATCGCCGCCACATCCGCACGCGCCGCTTTTGCCACGCGCAGACCATGGGAAGAGGTATTCGCGCTCTACTCTTTCACGCGTCCCCACTCCATCAACGAAGCCACCATGCGCGTGAAACGCAACCTCAACCACTTCCGCGTGAACTACTTCATGATGGTGCTCTTTGTTCTCTTTCTCAGCCTCCTCTGGCACCCGCTCTCGATAATCGTGTTTTTGGTGGCGCTGGTCGCTTGGTTCTTTCTCTACTTCTTCCGGGACGAGCCGGTGGTGGTGTTCGGCTCCTCGGTGGATGATAGGACGGTGGCGGCTGTCCTTGCGGCAGCGACCGTGTTGGCCTTGGTGTTCACCGGCGTGTGGGTGAACGTGGTGGCTTCGATTGTCGTCGGGATTGCGCTGGTGGTATTGCACGCTGCTTTTAGGAGCAGTGAAGATTTATACATGGATGAACACGAGGGTTACGACGGTGGGTTACTTTCGGTGGTTGGGGGTACCCCTACAAAACGAACGGGAGGGTACACTTAG 1140 0.5149 MVNNFVVVGTVEEIGDYCIIDHERRDCFRSTKDVDFGRSDSAKLLVDSGKCTGTSEDIPKSCFGTHIKQPEGNLIDAEGKRWDGVSGHGTAAAANGSLLKEPQYRGVRKRPWGKFTAEIRDPLKKARCPTGFHGLAGIADHEVNDSQTLPFLFIIIALTQHLNDTVHAQLNTGTYAMSSTSSSTPHYSSFPSPSSSSTATRPYFITIAATSARAAFATRRPWEEVFALYSFTRPHSINEATMRVKRNLNHFRVNYFMMVLFVLFLSLLWHPLSIIVFLVALVAWFFLYFFRDEPVVVFGSSVDDRTVAAVLAAATVLALVFTGVWVNVVASIVVGIALVVLHAAFRSSEDLYMDEHEGYDGGLLSVVGGTPTKRTGGYT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02756 379 ProSiteProfiles AP2/ERF domain profile. 103 202 IPR001471 GO:0003700|GO:0006355
Vimu6g02756 379 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 206 357 IPR004895 -
Vimu6g02756 379 Gene3D AP2/ERF domain 103 179 IPR036955 GO:0003700|GO:0006355
Vimu6g02756 379 Pfam PRA1 family protein 216 355 IPR004895 -
Vimu6g02756 379 SUPERFAMILY DNA-binding domain 103 133 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02756 Vimu-Chr6 24132313 24136850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02756 81 127 AP2-EREBP Transcription Factor Family AT3G20310 63.830 1.70e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02756 K20359 - gmx:100794255 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02756 6 24132313 24136850 Vimu6g02756 6 24132313 24136850 ECH