Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02752 ATGATTGAGAATCCTCTGAGTCTGGAACTCATAGCTCCTGTCTTCCTCTTCCTTCCCCTCATCTTCTTCTTCTTCTATTCCTCACTTTTCAACAACAAAGAGGCTGCTCCAACCAAACAAACCGTTACTATCCCAAAATCATACCCACTCATTGGCTCCTACCTTGCCCTCAAACGCATCGGCAACCGCCGTATTCAGTGGCTATCCGATGTAGTCCAAATCTCACCCGCCAACACATTCACCTTCCGTCGCCCACTGGGCCGCCTCCAAGTTTTCACTGGAAACCCCGCCACCGTGGAGCACATTCTCAAGACCCGCTTCTCCAACTACCAAAAGGGCTATTCCTTCATCAGCACCCTCTCCGATTTCCTCGGCACCGGAATCTTCAACGCCGACGGAAACACGTGGAAGTTCCAAAGGCAAGTCGCCAGCCACGAATTCAACACAAAGTCTCTCCGCAAGTTCGTTGAACACGTGGTGGATGCCGAACTCTCCGACCGCCTCGTCCCCATCATGGCTTCAGCGGCACAGCAAGACCAGACCCTCGATTTCCAAGACATCCTCCAACGCTTCGCCTTCGACAACATCTGCAAAATCGCCTTTGGCTTCGACGCGGAGTACCTGACGTCGTCAGCTGAACGGAGCAAGTTCGCGGTGGCGTACGAAGAAGCGACGGAGATAAGCAGCAAACGGTTCCGCGAACTGTCTCCGTTAGTGTGGAAAGTGAAGAGGGCACTGAACATAGGTTCCGAAAAGCGGTTGCGAATGGCTGTGAGGGAAGTGCACGAGTTCGCGAAGAACATAGTGAGAGAGAAGAAGAGGGAGTTGAAGGAGAAGGAATCCCTTGAATCTGTAGACATGCTTTCGCGGTTCTTGAGTTCGGGGCATTCTGACGAAGACTTTGTGACGGACATAGTCATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCAGCGCTGACTTGGTTTTTCTGGCTGCTATCGAAGTACCCTCGAGTGGAGAAGGAGATTGTGAAGGAGATAATGGAGAAATCGGAGGCTCCGGTCTATGATGAAGTGAAGCATATGGTTTACACGCATGCAGCGTTATGCGAGAGCATGAGGCTGTACCCGCCGGTGCCCATGGACACCAAGGAAGCAGTGGAGGACGACGTCTTGCCGGACGGGACGGTGGTGAAGAAGGGGACGCTGGTGACTTATCACGTGTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAGGATTGGGAGGAGTTTAAGCCAGAGAGGTGGTTGCAGAAGGTTGAATCCGGAAAGTGGAAGTTTGTGCCAAAAGATTCTTTCACGTATCCTGTGTTTCAAGCTGGTCCCAGAATGTGTTTGGGGAAGGATATGGCTTTTATGCAGATGCAGAGTGTGGTGGCTGGGATTCTGCGGCGGTTCGCGGTTGTTCCCACGGTGGCTGAAGGGGTGGAGCCCAACTTCATTTCCTTCCTGTCCTCCCAGATGGAAGGTGGTTTTCCAGTGAAGATCATTGAGAGGGAAAGCTCAAATTAA 1539 0.5224 MIENPLSLELIAPVFLFLPLIFFFFYSSLFNNKEAAPTKQTVTIPKSYPLIGSYLALKRIGNRRIQWLSDVVQISPANTFTFRRPLGRLQVFTGNPATVEHILKTRFSNYQKGYSFISTLSDFLGTGIFNADGNTWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLVPIMASAAQQDQTLDFQDILQRFAFDNICKIAFGFDAEYLTSSAERSKFAVAYEEATEISSKRFRELSPLVWKVKRALNIGSEKRLRMAVREVHEFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKYPRVEKEIVKEIMEKSEAPVYDEVKHMVYTHAALCESMRLYPPVPMDTKEAVEDDVLPDGTVVKKGTLVTYHVYAMGRLESIWGEDWEEFKPERWLQKVESGKWKFVPKDSFTYPVFQAGPRMCLGKDMAFMQMQSVVAGILRRFAVVPTVAEGVEPNFISFLSSQMEGGFPVKIIERESSN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02752 512 SUPERFAMILY Cytochrome P450 45 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 Pfam Cytochrome P450 45 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PANTHER CYTOCHROME P450 29 503 - -
Vimu6g02752 512 Coils Coil 262 285 - -
Vimu6g02752 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 Gene3D Cytochrome P450 26 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02752 512 CDD CYP86A 79 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02752 Vimu-Chr6 24084370 24086751 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02752 10 512 Cytochrome P450 AT5G63450 45.988 4.83e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02752 K20769 K13407 gmx:100818199 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02752 6 24084370 24086751 Vimu6g02752 6 24084370 24086751 ECH
Vimu6g02752 6 24084370 24086751 Vimu3g01519 3 28710062 28711588 PCT