Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02750 ATGATTGCGATTCCCCTGAATCTGGAGCTGATAGCTCCTGTCTTCCTCATTCTCTCCCTAATCCTTCCCCTCATCCTCTTCTTCTTCTACTCCTCACGTTTCAACAACAAAGAGGCTGCTCCAAACAAACAAACCGTTACTATCCCAAAATCATACCCACTCATTGGCTCCTACTTCGCCCTTAAACGCACCGGAAACCGCCGTATCCAGTGGCTATCTGATATAGTCCAAATCTCACCCGCCAACACATTCACCTTCCACCGCCCACTGGGCCGCCTCCAAGTCTTCACTGGCAACCCTGCCAACGTCGAGCACATTCTCAAGACCCGCTTCTCCAACTACCAAAAGGGTTATTCCGTCACTAGCACCCTCTCCGACTTCCTCGGCACGGGGATATTCAACACCGACGGCAACACGTGGAAGTTCCAAAGGCAAGTCGCCAGCCACGAATTCAACACAAAGTCTCTCCGCAAGTTCGTTGAACACGTGGTGGATGCCGAACTCTCCGACCGCCTCATCCCCATCATGGCTTCAGCGGCACAGCACAACCAGACCCTCGATTTCCAAGACATCCTCCAACGATTCGCCTTCGATAACATCTGCAAAATCGCCTTTGGCTTCGACGCGGAGTACCTGACGTCGTCAGCTGAACGGAGCAAGTTCGCGGTGGCGTACGAAGAAGCAATTGAGATAAGCAGCAAACGGTTCCGCGAACTGTCTCCGTTAGTGTGGAAAGTGAAGAGGGCACTGAACATAGGTTCCGAAAAGCGGTGTCGAATGGCTGTGAGGGAAGTGCACGAGTTCGCGAAGAACATAGTGAGAGAGAAGAAGAGGGAGTTGAAGGAGAAGGAATCCCTTGAATCTGTAGATATGCTTTCGCGGTTCTTGAGTTCGGGGCACTCTGATGAAGACTTTGTGACGGACATAGTCATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCAGCGCTGACTTGGTTTTTCTGGCTGCTATCGAAGTACCCTCGAGTGGAGAAAGAGATTGTGAAGGAGATAATGGAGAAATCGGAGGCTCCGGTCTATGATGAAGTGAAGCATATGGTTTACACGCATGCAGCGTTATGCGAGAGCATGAGGCTGTACCCGCCTGTGCCCATGGACACCAAGGAAGCAGTGGAGGACGACGTCTTGCCGGACGGGACGGTGGTGAAGAAGGGGTCGCTGGTGACTTATCACGTCTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAGGATTGGGCGGAGTTTAAGCCAGAGAGGTGGTTGCAGAAGGTTGAATCCGGAAAGTGGAAGTTTGTGCCAAAAGATTCTTTCACGTATCCTGTGTTTCAAGCTGGTCCCAGAATGTGTTTGGGGAAGGATATGGCTTTTATGCAGATGCAGAGTGTGGTGGCTGGGATTCTGCGGCGGTTCGCGGTTGTTCCCACGGTGGCTGAAGGGGTGGAGCTCAACTTCATTTCTTTCCTCTCCGCCCAGATGGGTGGTGGTTTTCCTGTGAAGATCATAGAGAAGGAAACCTCAAATTAA 1551 0.5177 MIAIPLNLELIAPVFLILSLILPLILFFFYSSRFNNKEAAPNKQTVTIPKSYPLIGSYFALKRTGNRRIQWLSDIVQISPANTFTFHRPLGRLQVFTGNPANVEHILKTRFSNYQKGYSVTSTLSDFLGTGIFNTDGNTWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLIPIMASAAQHNQTLDFQDILQRFAFDNICKIAFGFDAEYLTSSAERSKFAVAYEEAIEISSKRFRELSPLVWKVKRALNIGSEKRCRMAVREVHEFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKYPRVEKEIVKEIMEKSEAPVYDEVKHMVYTHAALCESMRLYPPVPMDTKEAVEDDVLPDGTVVKKGSLVTYHVYAMGRLESIWGEDWAEFKPERWLQKVESGKWKFVPKDSFTYPVFQAGPRMCLGKDMAFMQMQSVVAGILRRFAVVPTVAEGVELNFISFLSAQMGGGFPVKIIEKETSN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02750 516 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 Gene3D Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 PANTHER CYTOCHROME P450 33 507 - -
Vimu6g02750 516 SUPERFAMILY Cytochrome P450 49 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 Coils Coil 266 289 - -
Vimu6g02750 516 Pfam Cytochrome P450 50 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 CDD CYP86A 83 505 - -
Vimu6g02750 516 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02750 516 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02750 Vimu-Chr6 24064337 24065887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02750 8 516 Cytochrome P450 AT5G63450 45.914 4.52e-154 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02750 K20769 K13407 gmx:100817669 803.897