Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02748 ATGATTGAAATTCTTAAGAATATTCAGCTGATAGCTCCTCTCTTCCTCTTCCTTTCCCTCGTCCTTCCCCTCGTCATCTTCTTCTTCTACTCCTCACGTTTCAACAACAAACAGGCTGCTCCAAATAAACAAACTGTTACTATCCCATCATACCCACTCATTGGCTCCTACTTAGCCCTAAAACGCAGCGGCAACCGCCGTCTTCAGTGGGAATCTGATATAGTCCAAATCTCACCCGCCAACACCTTCACCTTCCACCGCCCACTGGGCCACCTCCAAGTCTTCACTGGCAACCCTGCCAACGTCGAGCACATTCTCAAGACCCGCTTCTCCAACTACCAAAAAGGCTATACCGTCATTAGTACGCTCTCCGACTTCCTCGGCACGGGGATATTCAACTCCGATGGCCACACATGGAAGTTCCAAAGACAACTCGCAAGCCACGAATTCAATACAAAGTCTCTCCGCAAGTTCGTAGAGCAAGTGGTGGATGCCGAACTCACCCACCACCTCATGCCCATCATGGCTTCAGCGGCACAACAAGACCAGACCCTCGATTTCCAAGACATCCTCCAACGCTTCGCCTTCGATAACATCTGCAAAATCGCCTTTGGATTCGACGCCAACTACCTGACGCCGTCGGTTGAACGGAGCAAGTTCGCGGTGGCGTACGAAGAAGCCACAGAGATAATCATTAATCGGTTCCGTGAACTGTTTCCGTTAGGGTGGAAAGTGAAGAGGGCGCTTAACATAGGTTCGGAAAAGCGGTTGCGAATGGCAGTGAGGGAAGTGCACGAGTTCGCGAAGAACATAGTAAGAGAGAAGAAGAGGGAGTTGAAGGAGAAGGAATCCCTTGAATCGGTAGACATGCTTTCCCGTTTCTTGAGTTCGGGGCACTCTGATGAAGAGTTTGTGACCGACATAGTCATAAGCTTTATATTGGCGGGAAAGGATACCACGTCAGCAGGGTTAACGTGGTTTTTCTGGCTGCTATCGAAGAACCCTCGAGTGGAGAAGGAGATTGTGAATGAGATATTGGACAAATCGGAGGCTGCGGTTTACGATGAGGTGAAGCATATGGTTTACACGCATGCATCATTGTGCGAGAGCATGAGACTGTACCCGCCGGTGCCCACGGACACCAAGGAAGCGGTGGAGGACGACGTTTTGCCGGATGGGACGGTGGTGAAGAAGGGGTCGCTGGTGACTTATCACGTGTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAGGATTGGGCAGAGTTTAAGCCAGAGAGGTGGTTAGAGAAGCTTGAATCCGGAAAGTGGAAGTTTGTGCCAAAAGATTCTTTCACATATCCTGTGTTTCAAGCTGGTCCCAGAATATGTTTGGGGAAAGATATGGCTTTTATGCAGATGCAAAGTGTGGTGGCTGGGATTCTTCGACGGTTCGCGGTTGTTCCCACGGTGGCTGAAGGGGTGGAGCCCAACTTCATTTCTTTCCTTTCCTCCCAGATGGAAGGTGGTTTTCCTGTCAAGATCATTGAGCGGGAAACCTCAAATTAA 1548 0.5006 MIEILKNIQLIAPLFLFLSLVLPLVIFFFYSSRFNNKQAAPNKQTVTIPSYPLIGSYLALKRSGNRRLQWESDIVQISPANTFTFHRPLGHLQVFTGNPANVEHILKTRFSNYQKGYTVISTLSDFLGTGIFNSDGHTWKFQRQLASHEFNTKSLRKFVEQVVDAELTHHLMPIMASAAQQDQTLDFQDILQRFAFDNICKIAFGFDANYLTPSVERSKFAVAYEEATEIIINRFRELFPLGWKVKRALNIGSEKRLRMAVREVHEFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSDEEFVTDIVISFILAGKDTTSAGLTWFFWLLSKNPRVEKEIVNEILDKSEAAVYDEVKHMVYTHASLCESMRLYPPVPTDTKEAVEDDVLPDGTVVKKGSLVTYHVYAMGRLESIWGEDWAEFKPERWLEKLESGKWKFVPKDSFTYPVFQAGPRICLGKDMAFMQMQSVVAGILRRFAVVPTVAEGVEPNFISFLSSQMEGGFPVKIIERETSN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02748 515 Coils Coil 265 288 - -
Vimu6g02748 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 CDD CYP86A 82 504 - -
Vimu6g02748 515 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 PANTHER CYTOCHROME P450 34 506 - -
Vimu6g02748 515 Pfam Cytochrome P450 80 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 SUPERFAMILY Cytochrome P450 48 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu6g02748 515 Gene3D Cytochrome P450 28 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02748 Vimu-Chr6 24038553 24040100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02748 2 515 Cytochrome P450 AT5G63450 46.718 4.97e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02748 K20769 K13407 gmx:100818199 799.66