Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g02737 | ATGTCCCCATTAACATTTCTTATAAGACTCTTTATGCCTCTTATTCCCACTTGTGTTCGTGTGCCTACAAATTTTATTCACATAAAATACACCTCTTTCTCTTCTGCTCATCATCACTATTATACTCATTCTATGGCTTCTGCAAGTGGAAATGCTGCCTCTAATGGCTCTGGCTCTCCTTGCGGGGCATGCAAATTCCTCAGGCGAAAGTGTGCAGCTGACTGCATCTTTGCACCTTACTTTTGCTCAGAACAAGGCCCTGCTAGATTCGCTGCCATACATAAAGTCTTTGGTGCCAGCAATGTTTCCAAGCTGCTTTTGCATATACCAGCTCATGATCGTTGTGAAGCTGTTGTCACAATTGCTTATGAGGCTCAGGCTCGTATCAGAGACCCCGTCTATGGCTGTGTCTCTCACATTTTTGCCTTACAACAACAGGTGGCATGCTTGCAAGCACAGCTGATGCAGGTGAAGGCTCAGCTGGCTCAGAACCTGATGGAGTCGAGGAACATGGAGAATAATAATCATCAGTGGGCAGGGAATCAAAGTGTTGCAGGAGAAGCAATGAACCATCCATTTTGTCCGACTTACATGAACCCTATATCTCCTCAAAGCTCTCTTGAGTCAATTGATCACAGCAGCATGAACGATGGAATGAGCATGCAAGATATACAAAGCAGAGAGGAAAGAGCATACAAGAACAATGAGTTGGGTGAGCTGCAAGAACTGGCGCTCAGAATGATGAGGAACTGA | 753 | 0.4502 | MSPLTFLIRLFMPLIPTCVRVPTNFIHIKYTSFSSAHHHYYTHSMASASGNAASNGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNLMESRNMENNNHQWAGNQSVAGEAMNHPFCPTYMNPISPQSSLESIDHSSMNDGMSMQDIQSREERAYKNNELGELQELALRMMRN | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g02737 | 250 | Pfam | Lateral organ boundaries (LOB) domain | 60 | 158 | IPR004883 | - | |
Vimu6g02737 | 250 | Coils | Coil | 140 | 160 | - | - | |
Vimu6g02737 | 250 | ProSiteProfiles | LOB domain profile. | 59 | 161 | IPR004883 | - | |
Vimu6g02737 | 250 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 56 | 223 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g02737 | Vimu-Chr6 | 23931357 | 23932904 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g02737 | 47 | 250 | AS2 family | AT2G42430 | 54.508 | 3.50e-78 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Vimu6g02737 | LOB | 1.2e-36 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g02737 | K13944 | - | gmx:100801508 | 359.762 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu6g02737 | 6 | 23931357 | 23932904 | Vimu6g02737 | 6 | 23931357 | 23932904 | ECH |